Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CHD8Q9HCK8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.43■□□□□ 0.22
CHD8Q9HCK8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD8Q9HCK8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.43■□□□□ 0.22
CHD8Q9HCK8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.43■□□□□ 0.22
CHD8Q9HCK8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD8Q9HCK8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHD8Q9HCK8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.43■□□□□ 0.22
CHD8Q9HCK8 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.43■□□□□ 0.22
CHD8Q9HCK8 AC243562.1-201ENST00000560672 389 ntBASIC16.43■□□□□ 0.22
CHD8Q9HCK8 AC026150.2-201ENST00000564693 1156 ntBASIC16.43■□□□□ 0.22
CHD8Q9HCK8 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.43■□□□□ 0.22
CHD8Q9HCK8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.43■□□□□ 0.22
CHD8Q9HCK8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD8Q9HCK8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD8Q9HCK8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CHD8Q9HCK8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHD8Q9HCK8 REXO1L6P-201ENST00000603433 1515 ntBASIC16.43■□□□□ 0.22
CHD8Q9HCK8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD8Q9HCK8 INE1-201ENST00000456273 945 ntBASIC16.42■□□□□ 0.22
CHD8Q9HCK8 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 AC079140.1-201ENST00000508039 487 ntBASIC16.42■□□□□ 0.22
CHD8Q9HCK8 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 FAM86MP-201ENST00000340703 885 ntBASIC16.42■□□□□ 0.22
CHD8Q9HCK8 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 AC092506.1-202ENST00000401022 528 ntBASIC16.42■□□□□ 0.22
CHD8Q9HCK8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 RBPMS2P1-201ENST00000437762 623 ntBASIC16.42■□□□□ 0.22
CHD8Q9HCK8 SPDYE14P-201ENST00000442619 822 ntBASIC16.42■□□□□ 0.22
CHD8Q9HCK8 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 AC122714.2-201ENST00000502787 707 ntBASIC16.42■□□□□ 0.22
CHD8Q9HCK8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 KRT8P23-201ENST00000560090 1207 ntBASIC16.42■□□□□ 0.22
CHD8Q9HCK8 AC004233.3-201ENST00000607794 1269 ntBASIC16.42■□□□□ 0.22
CHD8Q9HCK8 AC003101.2-201ENST00000612557 442 ntBASIC16.42■□□□□ 0.22
CHD8Q9HCK8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD8Q9HCK8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 FEM1AP3-201ENST00000403722 1741 ntBASIC16.41■□□□□ 0.22
CHD8Q9HCK8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.41■□□□□ 0.22
CHD8Q9HCK8 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 UXT-AS1-201ENST00000590504 1525 ntBASIC16.41■□□□□ 0.22
CHD8Q9HCK8 AC100757.3-201ENST00000622361 1406 ntBASIC16.41■□□□□ 0.22
CHD8Q9HCK8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 IGHV3-42-201ENST00000520410 361 ntBASIC16.41■□□□□ 0.22
CHD8Q9HCK8 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 AL049757.1-201ENST00000616842 1596 ntBASIC16.41■□□□□ 0.22
CHD8Q9HCK8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHD8Q9HCK8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 AC098614.1-201ENST00000368528 745 ntBASIC16.4■□□□□ 0.22
CHD8Q9HCK8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 AC069120.2-201ENST00000524091 540 ntBASIC16.4■□□□□ 0.22
CHD8Q9HCK8 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 GGTLC5P-201ENST00000617623 998 ntBASIC16.4■□□□□ 0.22
CHD8Q9HCK8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 AC132938.6-201ENST00000623828 1655 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms