Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 BX005266.1-201ENST00000473402 457 ntBASIC19.22■□□□□ 0.67
NXF3Q9H4D5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.22■□□□□ 0.67
NXF3Q9H4D5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 AC079776.2-201ENST00000641154 1609 ntBASIC19.21■□□□□ 0.67
NXF3Q9H4D5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 AC004817.3-201ENST00000602957 2129 ntBASIC19.21■□□□□ 0.67
NXF3Q9H4D5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.21■□□□□ 0.67
NXF3Q9H4D5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 AC093909.1-201ENST00000504731 1122 ntBASIC19.2■□□□□ 0.66
NXF3Q9H4D5 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 AC139887.3-201ENST00000568585 713 ntBASIC19.2■□□□□ 0.66
NXF3Q9H4D5 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 MTDHP4-201ENST00000600287 670 ntBASIC19.2■□□□□ 0.66
NXF3Q9H4D5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
NXF3Q9H4D5 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 AC103564.2-201ENST00000432853 1299 ntBASIC19.19■□□□□ 0.66
NXF3Q9H4D5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 AC012640.2-201ENST00000561606 901 ntBASIC19.19■□□□□ 0.66
NXF3Q9H4D5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NXF3Q9H4D5 AL671883.3-201ENST00000603274 991 ntBASIC19.19■□□□□ 0.66
NXF3Q9H4D5 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms