Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.26■□□□□ 0.83
ERCC4Q92889 FAM87A-204ENST00000613235 858 ntBASIC20.26■□□□□ 0.83
ERCC4Q92889 AC010653.2-201ENST00000623505 997 ntBASIC20.26■□□□□ 0.83
ERCC4Q92889 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC4Q92889 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC4Q92889 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC4Q92889 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.26■□□□□ 0.83
ERCC4Q92889 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
ERCC4Q92889 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC4Q92889 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ERCC4Q92889 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC4Q92889 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.26■□□□□ 0.83
ERCC4Q92889 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC4Q92889 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ERCC4Q92889 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC4Q92889 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.25■□□□□ 0.83
ERCC4Q92889 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC4Q92889 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC4Q92889 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC4Q92889 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC4Q92889 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC4Q92889 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
ERCC4Q92889 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC4Q92889 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC4Q92889 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC4Q92889 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC4Q92889 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ERCC4Q92889 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
ERCC4Q92889 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.25■□□□□ 0.83
ERCC4Q92889 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC4Q92889 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ERCC4Q92889 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.25■□□□□ 0.83
ERCC4Q92889 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.25■□□□□ 0.83
ERCC4Q92889 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.25■□□□□ 0.83
ERCC4Q92889 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.25■□□□□ 0.83
ERCC4Q92889 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
ERCC4Q92889 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ERCC4Q92889 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.25■□□□□ 0.83
ERCC4Q92889 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC4Q92889 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC4Q92889 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
ERCC4Q92889 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ERCC4Q92889 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ERCC4Q92889 AP001094.4-201ENST00000579008 2176 ntBASIC20.25■□□□□ 0.83
ERCC4Q92889 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC4Q92889 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC4Q92889 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC4Q92889 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC4Q92889 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC4Q92889 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC4Q92889 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
ERCC4Q92889 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC4Q92889 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC4Q92889 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ERCC4Q92889 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC4Q92889 PRORSD1P-202ENST00000563365 2154 ntBASIC20.24■□□□□ 0.83
ERCC4Q92889 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ERCC4Q92889 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.24■□□□□ 0.83
ERCC4Q92889 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.24■□□□□ 0.83
ERCC4Q92889 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC4Q92889 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC4Q92889 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ERCC4Q92889 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC4Q92889 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.24■□□□□ 0.83
ERCC4Q92889 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.24■□□□□ 0.83
ERCC4Q92889 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.24■□□□□ 0.83
ERCC4Q92889 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
ERCC4Q92889 EGLN1P1-201ENST00000531623 762 ntBASIC20.24■□□□□ 0.83
ERCC4Q92889 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC4Q92889 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.24■□□□□ 0.83
ERCC4Q92889 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.24■□□□□ 0.83
ERCC4Q92889 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ERCC4Q92889 AC084018.2-201ENST00000613093 2607 ntBASIC20.24■□□□□ 0.83
ERCC4Q92889 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC4Q92889 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC4Q92889 CROCCP2-202ENST00000412962 2773 ntBASIC20.24■□□□□ 0.83
ERCC4Q92889 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ERCC4Q92889 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.24■□□□□ 0.83
ERCC4Q92889 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
ERCC4Q92889 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC4Q92889 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC4Q92889 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC4Q92889 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC4Q92889 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ERCC4Q92889 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC4Q92889 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.24■□□□□ 0.83
ERCC4Q92889 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC4Q92889 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC4Q92889 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC4Q92889 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC4Q92889 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
ERCC4Q92889 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC4Q92889 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC4Q92889 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC4Q92889 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC4Q92889 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ERCC4Q92889 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC4Q92889 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ERCC4Q92889 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC4Q92889 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms