Protein–RNA interactions for Protein: Q91WM3

Rrp9, U3 small nucleolar RNA-interacting protein 2, mousemouse

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp9Q91WM3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.31■□□□□ 0.2
Rrp9Q91WM3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp9Q91WM3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.31■□□□□ 0.2
Rrp9Q91WM3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp9Q91WM3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp9Q91WM3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp9Q91WM3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rrp9Q91WM3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp9Q91WM3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp9Q91WM3 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp9Q91WM3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp9Q91WM3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp9Q91WM3 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp9Q91WM3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp9Q91WM3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp9Q91WM3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp9Q91WM3 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rrp9Q91WM3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp9Q91WM3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp9Q91WM3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp9Q91WM3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.3■□□□□ 0.2
Rrp9Q91WM3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.3■□□□□ 0.2
Rrp9Q91WM3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp9Q91WM3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp9Q91WM3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp9Q91WM3 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp9Q91WM3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp9Q91WM3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp9Q91WM3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp9Q91WM3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp9Q91WM3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp9Q91WM3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp9Q91WM3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp9Q91WM3 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp9Q91WM3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp9Q91WM3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp9Q91WM3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.29■□□□□ 0.2
Rrp9Q91WM3 Gm2399-201ENSMUST00000104944 225 ntBASIC16.29■□□□□ 0.2
Rrp9Q91WM3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rrp9Q91WM3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Rrp9Q91WM3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rrp9Q91WM3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp9Q91WM3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp9Q91WM3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp9Q91WM3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp9Q91WM3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.29■□□□□ 0.2
Rrp9Q91WM3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp9Q91WM3 Gm43134-201ENSMUST00000199434 1886 ntBASIC16.29■□□□□ 0.2
Rrp9Q91WM3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp9Q91WM3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp9Q91WM3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp9Q91WM3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp9Q91WM3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp9Q91WM3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Gm45011-201ENSMUST00000207620 2297 ntBASIC16.28■□□□□ 0.2
Rrp9Q91WM3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Rrp9Q91WM3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp9Q91WM3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC16.27■□□□□ 0.2
Rrp9Q91WM3 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp9Q91WM3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp9Q91WM3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Rrp9Q91WM3 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.27■□□□□ 0.2
Rrp9Q91WM3 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC16.27■□□□□ 0.2
Rrp9Q91WM3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp9Q91WM3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Rrp9Q91WM3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Rrp9Q91WM3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rrp9Q91WM3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms