Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.06■□□□□ 0.16
NHLRC1Q6VVB1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.06■□□□□ 0.16
NHLRC1Q6VVB1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NHLRC1Q6VVB1 KRT18P65-201ENST00000439811 1286 ntBASIC16.06■□□□□ 0.16
NHLRC1Q6VVB1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.06■□□□□ 0.16
NHLRC1Q6VVB1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.06■□□□□ 0.16
NHLRC1Q6VVB1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.06■□□□□ 0.16
NHLRC1Q6VVB1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NHLRC1Q6VVB1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.06■□□□□ 0.16
NHLRC1Q6VVB1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.06■□□□□ 0.16
NHLRC1Q6VVB1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.06■□□□□ 0.16
NHLRC1Q6VVB1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NHLRC1Q6VVB1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.06■□□□□ 0.16
NHLRC1Q6VVB1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.06■□□□□ 0.16
NHLRC1Q6VVB1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 AC100803.2-201ENST00000562459 1963 ntBASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NHLRC1Q6VVB1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 AL031133.1-201ENST00000406807 723 ntBASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 AC092647.4-201ENST00000457211 535 ntBASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 AL671277.2-201ENST00000458060 996 ntBASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 AP003733.1-201ENST00000491725 852 ntBASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 ZNF444P1-201ENST00000559497 298 ntBASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 AL390719.2-201ENST00000606993 987 ntBASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.04■□□□□ 0.16
NHLRC1Q6VVB1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NHLRC1Q6VVB1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms