Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.18■□□□□ 0.18
LCN1P1Q5VSP4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.18■□□□□ 0.18
LCN1P1Q5VSP4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.18■□□□□ 0.18
LCN1P1Q5VSP4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCN1P1Q5VSP4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.18■□□□□ 0.18
LCN1P1Q5VSP4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
LCN1P1Q5VSP4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
LCN1P1Q5VSP4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LCN1P1Q5VSP4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LCN1P1Q5VSP4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LCN1P1Q5VSP4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCN1P1Q5VSP4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LCN1P1Q5VSP4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
LCN1P1Q5VSP4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCN1P1Q5VSP4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
LCN1P1Q5VSP4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCN1P1Q5VSP4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
LCN1P1Q5VSP4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LCN1P1Q5VSP4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCN1P1Q5VSP4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 AL023806.1-201ENST00000603994 1649 ntBASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 AC012618.2-201ENST00000428058 849 ntBASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 REXO1L10P-201ENST00000615707 1290 ntBASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 REXO1L12P-201ENST00000622156 912 ntBASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 CR769767.2-201ENST00000622735 460 ntBASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 AC112497.1-201ENST00000624824 639 ntBASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 PKD1P5-201ENST00000532415 10291 ntBASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCN1P1Q5VSP4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 ABHD17AP1-201ENST00000358206 933 ntBASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 AP003041.3-201ENST00000527151 707 ntBASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 AC104390.1-201ENST00000555663 520 ntBASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 AL024508.2-201ENST00000607749 1894 ntBASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCN1P1Q5VSP4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.15■□□□□ 0.18
LCN1P1Q5VSP4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms