Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.66■□□□□ 0.1
TFF3Q07654 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TFF3Q07654 LAGE3P1-201ENST00000425356 484 ntBASIC15.66■□□□□ 0.1
TFF3Q07654 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TFF3Q07654 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.66■□□□□ 0.1
TFF3Q07654 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.66■□□□□ 0.1
TFF3Q07654 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.66■□□□□ 0.1
TFF3Q07654 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.66■□□□□ 0.1
TFF3Q07654 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.66■□□□□ 0.1
TFF3Q07654 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.66■□□□□ 0.1
TFF3Q07654 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.66■□□□□ 0.1
TFF3Q07654 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TFF3Q07654 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.66■□□□□ 0.1
TFF3Q07654 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.66■□□□□ 0.1
TFF3Q07654 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TFF3Q07654 AL138781.2-201ENST00000617896 1843 ntBASIC15.66■□□□□ 0.1
TFF3Q07654 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.66■□□□□ 0.1
TFF3Q07654 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
TFF3Q07654 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TFF3Q07654 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.65■□□□□ 0.1
TFF3Q07654 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TFF3Q07654 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
TFF3Q07654 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.65■□□□□ 0.1
TFF3Q07654 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.65■□□□□ 0.1
TFF3Q07654 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TFF3Q07654 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.65■□□□□ 0.1
TFF3Q07654 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
TFF3Q07654 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.65■□□□□ 0.1
TFF3Q07654 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TFF3Q07654 DNAJB3-201ENST00000446806 729 ntBASIC15.65■□□□□ 0.1
TFF3Q07654 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.65■□□□□ 0.1
TFF3Q07654 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TFF3Q07654 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.65■□□□□ 0.1
TFF3Q07654 AC112482.1-201ENST00000492080 688 ntBASIC15.65■□□□□ 0.1
TFF3Q07654 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.65■□□□□ 0.1
TFF3Q07654 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.65■□□□□ 0.1
TFF3Q07654 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.65■□□□□ 0.1
TFF3Q07654 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.65■□□□□ 0.1
TFF3Q07654 AL139424.1-201ENST00000607572 797 ntBASIC15.65■□□□□ 0.1
TFF3Q07654 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.65■□□□□ 0.1
TFF3Q07654 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
TFF3Q07654 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TFF3Q07654 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.65■□□□□ 0.1
TFF3Q07654 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TFF3Q07654 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TFF3Q07654 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TFF3Q07654 AC005082.1-201ENST00000413042 2259 ntBASIC15.65■□□□□ 0.1
TFF3Q07654 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TFF3Q07654 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.65■□□□□ 0.1
TFF3Q07654 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TFF3Q07654 LETM1P2-201ENST00000597330 2178 ntBASIC15.65■□□□□ 0.1
TFF3Q07654 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TFF3Q07654 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.64■□□□□ 0.1
TFF3Q07654 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TFF3Q07654 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TFF3Q07654 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
TFF3Q07654 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TFF3Q07654 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TFF3Q07654 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TFF3Q07654 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TFF3Q07654 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.64■□□□□ 0.09
TFF3Q07654 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TFF3Q07654 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TFF3Q07654 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TFF3Q07654 AC004832.2-201ENST00000426397 482 ntBASIC15.64■□□□□ 0.09
TFF3Q07654 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TFF3Q07654 AC009947.1-201ENST00000444350 727 ntBASIC15.64■□□□□ 0.09
TFF3Q07654 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.64■□□□□ 0.09
TFF3Q07654 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.64■□□□□ 0.09
TFF3Q07654 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
TFF3Q07654 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.64■□□□□ 0.09
TFF3Q07654 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.64■□□□□ 0.09
TFF3Q07654 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TFF3Q07654 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TFF3Q07654 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TFF3Q07654 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TFF3Q07654 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TFF3Q07654 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TFF3Q07654 AC097374.2-201ENST00000618617 1306 ntBASIC15.64■□□□□ 0.09
TFF3Q07654 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TFF3Q07654 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TFF3Q07654 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TFF3Q07654 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TFF3Q07654 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TFF3Q07654 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.64■□□□□ 0.09
TFF3Q07654 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TFF3Q07654 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.63■□□□□ 0.09
TFF3Q07654 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TFF3Q07654 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TFF3Q07654 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TFF3Q07654 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TFF3Q07654 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.63■□□□□ 0.09
TFF3Q07654 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TFF3Q07654 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.63■□□□□ 0.09
TFF3Q07654 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TFF3Q07654 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
TFF3Q07654 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TFF3Q07654 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.63■□□□□ 0.09
TFF3Q07654 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TFF3Q07654 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms