Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SMARCA4P51532 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SMARCA4P51532 AC097637.2-201ENST00000624096 1997 ntBASIC31.66■■■□□ 2.66
SMARCA4P51532 COPE-202ENST00000349893 948 ntTSL 2 BASIC31.66■■■□□ 2.66
SMARCA4P51532 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SMARCA4P51532 DDX43P3-201ENST00000441064 443 ntBASIC31.66■■■□□ 2.66
SMARCA4P51532 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC31.66■■■□□ 2.66
SMARCA4P51532 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC31.66■■■□□ 2.66
SMARCA4P51532 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SMARCA4P51532 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC31.66■■■□□ 2.66
SMARCA4P51532 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
SMARCA4P51532 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC31.66■■■□□ 2.66
SMARCA4P51532 REXO1L3P-201ENST00000622202 1288 ntBASIC31.66■■■□□ 2.66
SMARCA4P51532 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
SMARCA4P51532 REM2-202ENST00000536884 1331 ntTSL 2 BASIC31.66■■■□□ 2.66
SMARCA4P51532 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC31.66■■■□□ 2.66
SMARCA4P51532 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SMARCA4P51532 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SMARCA4P51532 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SMARCA4P51532 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC31.65■■■□□ 2.66
SMARCA4P51532 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
SMARCA4P51532 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SMARCA4P51532 CYP51A1P2-201ENST00000419457 1499 ntBASIC31.65■■■□□ 2.66
SMARCA4P51532 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
SMARCA4P51532 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
SMARCA4P51532 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
SMARCA4P51532 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC31.65■■■□□ 2.66
SMARCA4P51532 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC31.65■■■□□ 2.66
SMARCA4P51532 AL355306.1-201ENST00000415580 579 ntBASIC31.65■■■□□ 2.66
SMARCA4P51532 FAM86GP-201ENST00000448322 971 ntBASIC31.65■■■□□ 2.66
SMARCA4P51532 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC31.65■■■□□ 2.66
SMARCA4P51532 DAD1-205ENST00000543337 501 ntTSL 3 BASIC31.65■■■□□ 2.66
SMARCA4P51532 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC31.65■■■□□ 2.66
SMARCA4P51532 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC31.65■■■□□ 2.66
SMARCA4P51532 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC31.65■■■□□ 2.66
SMARCA4P51532 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
SMARCA4P51532 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
SMARCA4P51532 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC31.64■■■□□ 2.66
SMARCA4P51532 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SMARCA4P51532 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SMARCA4P51532 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC31.64■■■□□ 2.66
SMARCA4P51532 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
SMARCA4P51532 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
SMARCA4P51532 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
SMARCA4P51532 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
SMARCA4P51532 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC31.64■■■□□ 2.66
SMARCA4P51532 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC31.64■■■□□ 2.66
SMARCA4P51532 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC31.64■■■□□ 2.66
SMARCA4P51532 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SMARCA4P51532 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.65
SMARCA4P51532 MIR661-201ENST00000384842 89 ntBASIC31.64■■■□□ 2.65
SMARCA4P51532 FALEC-201ENST00000416894 566 ntTSL 3 BASIC31.64■■■□□ 2.65
SMARCA4P51532 AC004449.1-201ENST00000564240 433 ntBASIC31.64■■■□□ 2.65
SMARCA4P51532 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.65
SMARCA4P51532 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMARCA4P51532 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SMARCA4P51532 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMARCA4P51532 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMARCA4P51532 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMARCA4P51532 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SMARCA4P51532 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC31.63■■■□□ 2.65
SMARCA4P51532 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
SMARCA4P51532 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
SMARCA4P51532 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SMARCA4P51532 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SMARCA4P51532 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
SMARCA4P51532 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC31.62■■■□□ 2.65
SMARCA4P51532 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC31.62■■■□□ 2.65
SMARCA4P51532 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC31.62■■■□□ 2.65
SMARCA4P51532 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SMARCA4P51532 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
SMARCA4P51532 BX276092.7-203ENST00000637198 1536 ntBASIC31.62■■■□□ 2.65
SMARCA4P51532 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
SMARCA4P51532 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC31.62■■■□□ 2.65
SMARCA4P51532 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SMARCA4P51532 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC31.61■■■□□ 2.65
SMARCA4P51532 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SMARCA4P51532 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SMARCA4P51532 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC31.61■■■□□ 2.65
SMARCA4P51532 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SMARCA4P51532 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC31.61■■■□□ 2.65
SMARCA4P51532 AC051619.7-201ENST00000568314 623 ntBASIC31.61■■■□□ 2.65
SMARCA4P51532 MIR4745-201ENST00000577608 62 ntBASIC31.61■■■□□ 2.65
SMARCA4P51532 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC31.61■■■□□ 2.65
SMARCA4P51532 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC31.61■■■□□ 2.65
SMARCA4P51532 BSG-215ENST00000618006 1329 ntTSL 2 BASIC31.61■■■□□ 2.65
SMARCA4P51532 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
SMARCA4P51532 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SMARCA4P51532 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC31.61■■■□□ 2.65
SMARCA4P51532 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SMARCA4P51532 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SMARCA4P51532 PMS2P4-201ENST00000412466 1052 ntBASIC31.6■■■□□ 2.65
SMARCA4P51532 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC31.6■■■□□ 2.65
SMARCA4P51532 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
SMARCA4P51532 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC31.6■■■□□ 2.65
SMARCA4P51532 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
SMARCA4P51532 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC31.6■■■□□ 2.65
SMARCA4P51532 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SMARCA4P51532 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC31.6■■■□□ 2.65
SMARCA4P51532 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC31.6■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms