Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.67■□□□□ 0.74
CDK7P50613 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CDK7P50613 CYMP-203ENST00000474680 1263 ntBASIC19.67■□□□□ 0.74
CDK7P50613 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.67■□□□□ 0.74
CDK7P50613 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK7P50613 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.67■□□□□ 0.74
CDK7P50613 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CDK7P50613 MIR3197-201ENST00000582241 73 ntBASIC19.67■□□□□ 0.74
CDK7P50613 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.67■□□□□ 0.74
CDK7P50613 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.67■□□□□ 0.74
CDK7P50613 AC004706.3-202ENST00000621574 984 ntBASIC19.67■□□□□ 0.74
CDK7P50613 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.67■□□□□ 0.74
CDK7P50613 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK7P50613 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK7P50613 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK7P50613 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK7P50613 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.67■□□□□ 0.74
CDK7P50613 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK7P50613 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.67■□□□□ 0.74
CDK7P50613 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK7P50613 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK7P50613 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CDK7P50613 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK7P50613 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK7P50613 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDK7P50613 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK7P50613 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.66■□□□□ 0.74
CDK7P50613 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDK7P50613 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDK7P50613 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK7P50613 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK7P50613 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.66■□□□□ 0.74
CDK7P50613 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK7P50613 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.66■□□□□ 0.74
CDK7P50613 ALG1L5P-201ENST00000482043 771 ntBASIC19.66■□□□□ 0.74
CDK7P50613 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.66■□□□□ 0.74
CDK7P50613 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK7P50613 SNHG9-202ENST00000564014 471 ntBASIC19.66■□□□□ 0.74
CDK7P50613 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK7P50613 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
CDK7P50613 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.66■□□□□ 0.74
CDK7P50613 C20orf181-201ENST00000623918 480 ntBASIC19.66■□□□□ 0.74
CDK7P50613 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDK7P50613 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK7P50613 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK7P50613 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK7P50613 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK7P50613 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK7P50613 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK7P50613 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CDK7P50613 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK7P50613 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CDK7P50613 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK7P50613 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK7P50613 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK7P50613 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK7P50613 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK7P50613 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CDK7P50613 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CDK7P50613 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK7P50613 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK7P50613 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDK7P50613 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CDK7P50613 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CDK7P50613 CRYGEP-201ENST00000412192 528 ntBASIC19.65■□□□□ 0.74
CDK7P50613 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.65■□□□□ 0.74
CDK7P50613 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CDK7P50613 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.65■□□□□ 0.74
CDK7P50613 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK7P50613 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK7P50613 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CDK7P50613 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CDK7P50613 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.65■□□□□ 0.74
CDK7P50613 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK7P50613 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.65■□□□□ 0.74
CDK7P50613 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CDK7P50613 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
CDK7P50613 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDK7P50613 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.64■□□□□ 0.74
CDK7P50613 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.64■□□□□ 0.74
CDK7P50613 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK7P50613 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK7P50613 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK7P50613 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK7P50613 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.64■□□□□ 0.73
CDK7P50613 AC103564.2-201ENST00000432853 1299 ntBASIC19.64■□□□□ 0.73
CDK7P50613 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CDK7P50613 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.64■□□□□ 0.73
CDK7P50613 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.64■□□□□ 0.73
CDK7P50613 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.64■□□□□ 0.73
CDK7P50613 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.64■□□□□ 0.73
CDK7P50613 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.64■□□□□ 0.73
CDK7P50613 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK7P50613 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDK7P50613 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.64■□□□□ 0.73
CDK7P50613 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.64■□□□□ 0.73
CDK7P50613 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDK7P50613 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK7P50613 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK7P50613 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms