Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC6A12P48065 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC6A12P48065 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SLC6A12P48065 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC6A12P48065 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 AC005104.2-201ENST00000427818 678 ntBASIC17.21■□□□□ 0.35
SLC6A12P48065 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.21■□□□□ 0.35
SLC6A12P48065 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC6A12P48065 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 AC090616.6-201ENST00000582640 721 ntBASIC17.21■□□□□ 0.35
SLC6A12P48065 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC6A12P48065 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC6A12P48065 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A12P48065 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC6A12P48065 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.21■□□□□ 0.34
SLC6A12P48065 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.21■□□□□ 0.34
SLC6A12P48065 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.21■□□□□ 0.34
SLC6A12P48065 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A12P48065 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A12P48065 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC6A12P48065 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A12P48065 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A12P48065 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A12P48065 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A12P48065 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC6A12P48065 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SLC6A12P48065 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A12P48065 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC6A12P48065 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SLC6A12P48065 AC116407.4-201ENST00000623319 1061 ntBASIC17.2■□□□□ 0.34
SLC6A12P48065 AC124864.1-201ENST00000623408 392 ntBASIC17.2■□□□□ 0.34
SLC6A12P48065 AL590326.2-201ENST00000625139 305 ntBASIC17.2■□□□□ 0.34
SLC6A12P48065 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC6A12P48065 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC6A12P48065 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A12P48065 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
SLC6A12P48065 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A12P48065 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A12P48065 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A12P48065 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
SLC6A12P48065 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A12P48065 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A12P48065 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A12P48065 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC6A12P48065 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC6A12P48065 AC010460.3-201ENST00000511359 1579 ntBASIC17.19■□□□□ 0.34
SLC6A12P48065 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC6A12P48065 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SLC6A12P48065 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC6A12P48065 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC6A12P48065 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC6A12P48065 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
SLC6A12P48065 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC6A12P48065 AL645608.8-201ENST00000606034 2086 ntBASIC17.19■□□□□ 0.34
SLC6A12P48065 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC6A12P48065 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC6A12P48065 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC6A12P48065 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SLC6A12P48065 AC139713.2-201ENST00000641328 2723 ntBASIC17.19■□□□□ 0.34
SLC6A12P48065 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
SLC6A12P48065 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SLC6A12P48065 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC6A12P48065 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC6A12P48065 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
SLC6A12P48065 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
SLC6A12P48065 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC6A12P48065 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC6A12P48065 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC6A12P48065 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC6A12P48065 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC6A12P48065 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC6A12P48065 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC6A12P48065 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC6A12P48065 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
SLC6A12P48065 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SLC6A12P48065 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A12P48065 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A12P48065 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A12P48065 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SLC6A12P48065 SIRPAP1-201ENST00000448467 1770 ntBASIC17.18■□□□□ 0.34
SLC6A12P48065 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC6A12P48065 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.18■□□□□ 0.34
SLC6A12P48065 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A12P48065 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A12P48065 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A12P48065 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms