Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 AC140658.5-201ENST00000438532 169 ntBASIC31.24■■■□□ 2.59
NCAPD3P42695 COQ6-210ENST00000554920 649 ntTSL 3 BASIC31.24■■■□□ 2.59
NCAPD3P42695 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC31.24■■■□□ 2.59
NCAPD3P42695 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NCAPD3P42695 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
NCAPD3P42695 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
NCAPD3P42695 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NCAPD3P42695 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
NCAPD3P42695 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
NCAPD3P42695 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NCAPD3P42695 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
NCAPD3P42695 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NCAPD3P42695 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NCAPD3P42695 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
NCAPD3P42695 RN7SL589P-201ENST00000481268 310 ntBASIC31.23■■■□□ 2.59
NCAPD3P42695 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
NCAPD3P42695 AC079140.1-201ENST00000508039 487 ntBASIC31.23■■■□□ 2.59
NCAPD3P42695 STK19B-204ENST00000512515 211 ntBASIC31.23■■■□□ 2.59
NCAPD3P42695 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC31.23■■■□□ 2.59
NCAPD3P42695 FAM86C2P-203ENST00000528684 1004 ntBASIC31.23■■■□□ 2.59
NCAPD3P42695 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
NCAPD3P42695 NOP2-220ENST00000545915 630 ntTSL 2 BASIC31.23■■■□□ 2.59
NCAPD3P42695 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC31.23■■■□□ 2.59
NCAPD3P42695 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NCAPD3P42695 CYP51A1P2-201ENST00000419457 1499 ntBASIC31.23■■■□□ 2.59
NCAPD3P42695 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
NCAPD3P42695 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
NCAPD3P42695 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC31.22■■■□□ 2.59
NCAPD3P42695 AC109462.3-201ENST00000573934 613 ntBASIC31.22■■■□□ 2.59
NCAPD3P42695 AL158211.3-201ENST00000607385 239 ntBASIC31.22■■■□□ 2.59
NCAPD3P42695 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC31.22■■■□□ 2.59
NCAPD3P42695 FO538757.1-201ENST00000623083 1397 ntBASIC31.22■■■□□ 2.59
NCAPD3P42695 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NCAPD3P42695 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NCAPD3P42695 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
NCAPD3P42695 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC31.22■■■□□ 2.59
NCAPD3P42695 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
NCAPD3P42695 ACTG1P4-201ENST00000425123 1122 ntBASIC31.21■■■□□ 2.59
NCAPD3P42695 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
NCAPD3P42695 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
NCAPD3P42695 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC31.21■■■□□ 2.59
NCAPD3P42695 TMED1-207ENST00000591695 809 ntTSL 5 BASIC31.21■■■□□ 2.59
NCAPD3P42695 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC31.21■■■□□ 2.59
NCAPD3P42695 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NCAPD3P42695 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC31.21■■■□□ 2.59
NCAPD3P42695 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC31.21■■■□□ 2.59
NCAPD3P42695 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC31.21■■■□□ 2.59
NCAPD3P42695 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NCAPD3P42695 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC31.21■■■□□ 2.59
NCAPD3P42695 SPDYE11-202ENST00000450699 704 ntBASIC31.21■■■□□ 2.59
NCAPD3P42695 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
NCAPD3P42695 AC243562.1-201ENST00000560672 389 ntBASIC31.21■■■□□ 2.59
NCAPD3P42695 SPDYE9P-201ENST00000570642 692 ntBASIC31.21■■■□□ 2.59
NCAPD3P42695 SPDYE10P-202ENST00000612005 668 ntBASIC31.21■■■□□ 2.59
NCAPD3P42695 SPDYE8P-202ENST00000612377 668 ntBASIC31.21■■■□□ 2.59
NCAPD3P42695 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
NCAPD3P42695 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC31.21■■■□□ 2.59
NCAPD3P42695 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
NCAPD3P42695 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
NCAPD3P42695 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
NCAPD3P42695 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC31.2■■■□□ 2.59
NCAPD3P42695 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
NCAPD3P42695 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
NCAPD3P42695 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC31.2■■■□□ 2.58
NCAPD3P42695 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC31.2■■■□□ 2.58
NCAPD3P42695 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
NCAPD3P42695 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC31.2■■■□□ 2.58
NCAPD3P42695 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
NCAPD3P42695 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
NCAPD3P42695 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
NCAPD3P42695 SLC25A39P2-201ENST00000537614 270 ntBASIC31.2■■■□□ 2.58
NCAPD3P42695 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC31.2■■■□□ 2.58
NCAPD3P42695 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC31.2■■■□□ 2.58
NCAPD3P42695 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC31.2■■■□□ 2.58
NCAPD3P42695 MIR6752-201ENST00000618442 71 ntBASIC31.2■■■□□ 2.58
NCAPD3P42695 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
NCAPD3P42695 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
NCAPD3P42695 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
NCAPD3P42695 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
NCAPD3P42695 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
NCAPD3P42695 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
NCAPD3P42695 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC31.19■■■□□ 2.58
NCAPD3P42695 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
NCAPD3P42695 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC31.19■■■□□ 2.58
NCAPD3P42695 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
NCAPD3P42695 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
NCAPD3P42695 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
NCAPD3P42695 COX5BP8-201ENST00000416911 349 ntBASIC31.19■■■□□ 2.58
NCAPD3P42695 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC31.19■■■□□ 2.58
NCAPD3P42695 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC31.19■■■□□ 2.58
NCAPD3P42695 AC125807.1-201ENST00000483097 614 ntBASIC31.19■■■□□ 2.58
NCAPD3P42695 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC31.19■■■□□ 2.58
NCAPD3P42695 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC31.19■■■□□ 2.58
NCAPD3P42695 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
NCAPD3P42695 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC31.18■■■□□ 2.58
NCAPD3P42695 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
NCAPD3P42695 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC31.18■■■□□ 2.58
NCAPD3P42695 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC31.18■■■□□ 2.58
NCAPD3P42695 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC31.18■■■□□ 2.58
NCAPD3P42695 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms