Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.17■□□□□ 0.02
HIST1H1DP16402 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HIST1H1DP16402 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1DP16402 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1DP16402 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H1DP16402 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1DP16402 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1DP16402 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1DP16402 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1DP16402 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1DP16402 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1DP16402 ABHD17AP1-201ENST00000358206 933 ntBASIC15.16■□□□□ 0.02
HIST1H1DP16402 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1DP16402 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1DP16402 AL355355.2-201ENST00000442321 338 ntBASIC15.16■□□□□ 0.02
HIST1H1DP16402 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1DP16402 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 BX088651.1-201ENST00000540551 451 ntBASIC15.16■□□□□ 0.02
HIST1H1DP16402 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1DP16402 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 AC113410.3-201ENST00000623366 203 ntBASIC15.16■□□□□ 0.02
HIST1H1DP16402 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1DP16402 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1DP16402 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1DP16402 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1DP16402 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H1DP16402 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 TNRC18P3-201ENST00000441896 2691 ntBASIC15.16■□□□□ 0.02
HIST1H1DP16402 LINC00167-201ENST00000530583 1419 ntBASIC15.16■□□□□ 0.02
HIST1H1DP16402 AC092338.2-201ENST00000568827 1415 ntBASIC15.16■□□□□ 0.02
HIST1H1DP16402 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.16■□□□□ 0.02
HIST1H1DP16402 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST1H1DP16402 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HIST1H1DP16402 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST1H1DP16402 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST1H1DP16402 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
HIST1H1DP16402 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST1H1DP16402 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HIST1H1DP16402 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.15■□□□□ 0.02
HIST1H1DP16402 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HIST1H1DP16402 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST1H1DP16402 RPS2P55-201ENST00000397318 883 ntBASIC15.15■□□□□ 0.02
HIST1H1DP16402 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.15■□□□□ 0.02
HIST1H1DP16402 CCR12P-201ENST00000446203 998 ntBASIC15.15■□□□□ 0.02
HIST1H1DP16402 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST1H1DP16402 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.15■□□□□ 0.02
HIST1H1DP16402 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 AC107956.1-201ENST00000494359 873 ntBASIC15.15■□□□□ 0.02
HIST1H1DP16402 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.15■□□□□ 0.02
HIST1H1DP16402 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST1H1DP16402 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HIST1H1DP16402 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HIST1H1DP16402 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1DP16402 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
HIST1H1DP16402 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H1DP16402 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H1DP16402 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HIST1H1DP16402 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H1DP16402 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms