Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND1P03886 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND1P03886 AC036111.1-201ENST00000533973 1582 ntBASIC16.87■□□□□ 0.29
MT-ND1P03886 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
MT-ND1P03886 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND1P03886 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
MT-ND1P03886 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND1P03886 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.87■□□□□ 0.29
MT-ND1P03886 AC097488.1-201ENST00000507834 756 ntBASIC16.87■□□□□ 0.29
MT-ND1P03886 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND1P03886 AC233702.5-201ENST00000584107 538 ntBASIC16.87■□□□□ 0.29
MT-ND1P03886 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.87■□□□□ 0.29
MT-ND1P03886 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND1P03886 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND1P03886 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.87■□□□□ 0.29
MT-ND1P03886 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND1P03886 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND1P03886 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
MT-ND1P03886 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND1P03886 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
MT-ND1P03886 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND1P03886 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND1P03886 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND1P03886 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.86■□□□□ 0.29
MT-ND1P03886 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND1P03886 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND1P03886 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND1P03886 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND1P03886 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
MT-ND1P03886 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
MT-ND1P03886 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
MT-ND1P03886 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND1P03886 AC079328.2-201ENST00000561241 3354 ntBASIC16.86■□□□□ 0.29
MT-ND1P03886 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.86■□□□□ 0.29
MT-ND1P03886 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
MT-ND1P03886 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
MT-ND1P03886 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
MT-ND1P03886 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND1P03886 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.86■□□□□ 0.29
MT-ND1P03886 CA15P1-201ENST00000481698 905 ntBASIC16.86■□□□□ 0.29
MT-ND1P03886 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.86■□□□□ 0.29
MT-ND1P03886 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.86■□□□□ 0.29
MT-ND1P03886 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.86■□□□□ 0.29
MT-ND1P03886 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.86■□□□□ 0.29
MT-ND1P03886 AC113410.3-201ENST00000623366 203 ntBASIC16.86■□□□□ 0.29
MT-ND1P03886 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.86■□□□□ 0.29
MT-ND1P03886 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.86■□□□□ 0.29
MT-ND1P03886 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
MT-ND1P03886 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND1P03886 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND1P03886 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND1P03886 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND1P03886 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.86■□□□□ 0.29
MT-ND1P03886 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND1P03886 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND1P03886 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND1P03886 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND1P03886 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
MT-ND1P03886 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND1P03886 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
MT-ND1P03886 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.85■□□□□ 0.29
MT-ND1P03886 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND1P03886 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
MT-ND1P03886 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MT-ND1P03886 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND1P03886 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
MT-ND1P03886 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND1P03886 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
MT-ND1P03886 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.85■□□□□ 0.29
MT-ND1P03886 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND1P03886 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.85■□□□□ 0.29
MT-ND1P03886 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.85■□□□□ 0.29
MT-ND1P03886 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.85■□□□□ 0.29
MT-ND1P03886 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
MT-ND1P03886 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND1P03886 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MT-ND1P03886 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.85■□□□□ 0.29
MT-ND1P03886 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND1P03886 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.85■□□□□ 0.29
MT-ND1P03886 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.85■□□□□ 0.29
MT-ND1P03886 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.85■□□□□ 0.29
MT-ND1P03886 AL049637.2-201ENST00000641778 930 ntBASIC16.85■□□□□ 0.29
MT-ND1P03886 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND1P03886 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND1P03886 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND1P03886 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.85■□□□□ 0.29
MT-ND1P03886 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND1P03886 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.85■□□□□ 0.29
MT-ND1P03886 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND1P03886 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
MT-ND1P03886 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND1P03886 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND1P03886 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.85■□□□□ 0.29
MT-ND1P03886 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND1P03886 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND1P03886 AC133963.1-201ENST00000504166 1679 ntBASIC16.85■□□□□ 0.29
MT-ND1P03886 AC106886.4-201ENST00000623557 2502 ntBASIC16.85■□□□□ 0.29
MT-ND1P03886 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND1P03886 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.84■□□□□ 0.29
MT-ND1P03886 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms