Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.21■□□□□ 0.35
GFRA3O60609 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.21■□□□□ 0.35
GFRA3O60609 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.21■□□□□ 0.35
GFRA3O60609 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
GFRA3O60609 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.21■□□□□ 0.35
GFRA3O60609 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GFRA3O60609 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
GFRA3O60609 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GFRA3O60609 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GFRA3O60609 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
GFRA3O60609 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GFRA3O60609 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
GFRA3O60609 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
GFRA3O60609 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
GFRA3O60609 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GFRA3O60609 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GFRA3O60609 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
GFRA3O60609 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GFRA3O60609 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
GFRA3O60609 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GFRA3O60609 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.2■□□□□ 0.34
GFRA3O60609 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GFRA3O60609 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.2■□□□□ 0.34
GFRA3O60609 AL513480.1-201ENST00000451731 511 ntBASIC17.2■□□□□ 0.34
GFRA3O60609 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
GFRA3O60609 AC026150.2-201ENST00000564693 1156 ntBASIC17.2■□□□□ 0.34
GFRA3O60609 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GFRA3O60609 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.2■□□□□ 0.34
GFRA3O60609 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
GFRA3O60609 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.2■□□□□ 0.34
GFRA3O60609 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
GFRA3O60609 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
GFRA3O60609 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GFRA3O60609 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GFRA3O60609 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
GFRA3O60609 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GFRA3O60609 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GFRA3O60609 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.19■□□□□ 0.34
GFRA3O60609 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GFRA3O60609 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.19■□□□□ 0.34
GFRA3O60609 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GFRA3O60609 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GFRA3O60609 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GFRA3O60609 HCG4-201ENST00000418983 998 ntBASIC17.19■□□□□ 0.34
GFRA3O60609 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.19■□□□□ 0.34
GFRA3O60609 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GFRA3O60609 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.19■□□□□ 0.34
GFRA3O60609 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.19■□□□□ 0.34
GFRA3O60609 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.19■□□□□ 0.34
GFRA3O60609 AC099522.2-201ENST00000607001 744 ntBASIC17.19■□□□□ 0.34
GFRA3O60609 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.19■□□□□ 0.34
GFRA3O60609 Z99916.3-201ENST00000623422 1080 ntBASIC17.19■□□□□ 0.34
GFRA3O60609 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GFRA3O60609 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GFRA3O60609 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GFRA3O60609 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GFRA3O60609 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
GFRA3O60609 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.19■□□□□ 0.34
GFRA3O60609 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.19■□□□□ 0.34
GFRA3O60609 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.19■□□□□ 0.34
GFRA3O60609 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.19■□□□□ 0.34
GFRA3O60609 IRX1P1-201ENST00000438849 1838 ntBASIC17.19■□□□□ 0.34
GFRA3O60609 AC010460.3-201ENST00000511359 1579 ntBASIC17.19■□□□□ 0.34
GFRA3O60609 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GFRA3O60609 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GFRA3O60609 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GFRA3O60609 SDHAP2-201ENST00000455183 2001 ntBASIC17.18■□□□□ 0.34
GFRA3O60609 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GFRA3O60609 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GFRA3O60609 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GFRA3O60609 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GFRA3O60609 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.18■□□□□ 0.34
GFRA3O60609 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GFRA3O60609 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.18■□□□□ 0.34
GFRA3O60609 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GFRA3O60609 AC098614.1-201ENST00000368528 745 ntBASIC17.18■□□□□ 0.34
GFRA3O60609 AC092580.3-201ENST00000430932 139 ntBASIC17.18■□□□□ 0.34
GFRA3O60609 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
GFRA3O60609 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GFRA3O60609 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.18■□□□□ 0.34
GFRA3O60609 TP53TG3HP-202ENST00000569755 579 ntBASIC17.18■□□□□ 0.34
GFRA3O60609 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GFRA3O60609 TMEM261P1-201ENST00000604899 340 ntBASIC17.18■□□□□ 0.34
GFRA3O60609 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
GFRA3O60609 SPTSSB-204ENST00000617024 1292 ntBASIC17.18■□□□□ 0.34
GFRA3O60609 MIR6080-201ENST00000617359 66 ntBASIC17.18■□□□□ 0.34
GFRA3O60609 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GFRA3O60609 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GFRA3O60609 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.18■□□□□ 0.34
GFRA3O60609 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
GFRA3O60609 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.18■□□□□ 0.34
GFRA3O60609 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
GFRA3O60609 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GFRA3O60609 AL512408.1-201ENST00000569378 2000 ntBASIC17.18■□□□□ 0.34
GFRA3O60609 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
GFRA3O60609 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.17■□□□□ 0.34
GFRA3O60609 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
GFRA3O60609 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GFRA3O60609 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
GFRA3O60609 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms