Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.23■□□□□ 0.35
SLC28A2O43868 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC28A2O43868 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
SLC28A2O43868 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC28A2O43868 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC28A2O43868 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A2O43868 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A2O43868 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A2O43868 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A2O43868 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SLC28A2O43868 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A2O43868 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A2O43868 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC28A2O43868 AC093677.2-201ENST00000600169 1863 ntBASIC17.22■□□□□ 0.35
SLC28A2O43868 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SLC28A2O43868 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A2O43868 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A2O43868 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A2O43868 AC068880.1-201ENST00000507289 2297 ntBASIC17.22■□□□□ 0.35
SLC28A2O43868 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A2O43868 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A2O43868 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A2O43868 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A2O43868 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC28A2O43868 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A2O43868 ESPNP-201ENST00000270691 2015 ntBASIC17.22■□□□□ 0.35
SLC28A2O43868 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A2O43868 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A2O43868 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC28A2O43868 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SLC28A2O43868 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A2O43868 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC28A2O43868 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC28A2O43868 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A2O43868 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A2O43868 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A2O43868 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A2O43868 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A2O43868 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A2O43868 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.22■□□□□ 0.35
SLC28A2O43868 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC28A2O43868 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A2O43868 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC28A2O43868 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A2O43868 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SLC28A2O43868 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A2O43868 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SLC28A2O43868 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SLC28A2O43868 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC28A2O43868 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC28A2O43868 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SLC28A2O43868 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC28A2O43868 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC28A2O43868 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC28A2O43868 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC28A2O43868 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SLC28A2O43868 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC28A2O43868 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC28A2O43868 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC28A2O43868 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC28A2O43868 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC28A2O43868 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
SLC28A2O43868 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC28A2O43868 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SLC28A2O43868 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC28A2O43868 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC28A2O43868 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.21■□□□□ 0.35
SLC28A2O43868 AC005104.2-201ENST00000427818 678 ntBASIC17.21■□□□□ 0.35
SLC28A2O43868 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC28A2O43868 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC28A2O43868 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.21■□□□□ 0.35
SLC28A2O43868 AC074051.2-201ENST00000565115 352 ntBASIC17.21■□□□□ 0.35
SLC28A2O43868 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.21■□□□□ 0.35
SLC28A2O43868 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC28A2O43868 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC28A2O43868 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC28A2O43868 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC28A2O43868 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
SLC28A2O43868 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC28A2O43868 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC28A2O43868 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC28A2O43868 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC28A2O43868 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC28A2O43868 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC28A2O43868 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC28A2O43868 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC28A2O43868 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC28A2O43868 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC28A2O43868 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
SLC28A2O43868 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC28A2O43868 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC28A2O43868 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC28A2O43868 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC28A2O43868 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC28A2O43868 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC28A2O43868 MIR3180-5-201ENST00000583743 153 ntBASIC17.2■□□□□ 0.34
SLC28A2O43868 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC28A2O43868 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.2■□□□□ 0.34
SLC28A2O43868 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
SLC28A2O43868 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms