Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COCHO43405 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
COCHO43405 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COCHO43405 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COCHO43405 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
COCHO43405 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COCHO43405 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.4■□□□□ 0.54
COCHO43405 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COCHO43405 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COCHO43405 AC025062.2-201ENST00000605477 670 ntBASIC18.4■□□□□ 0.54
COCHO43405 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.4■□□□□ 0.54
COCHO43405 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.4■□□□□ 0.54
COCHO43405 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
COCHO43405 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
COCHO43405 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COCHO43405 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.4■□□□□ 0.54
COCHO43405 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.4■□□□□ 0.54
COCHO43405 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COCHO43405 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COCHO43405 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COCHO43405 AC243591.1-201ENST00000452967 1364 ntBASIC18.4■□□□□ 0.54
COCHO43405 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
COCHO43405 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COCHO43405 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.4■□□□□ 0.54
COCHO43405 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COCHO43405 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COCHO43405 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
COCHO43405 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
COCHO43405 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COCHO43405 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.39■□□□□ 0.54
COCHO43405 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.39■□□□□ 0.53
COCHO43405 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COCHO43405 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
COCHO43405 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.39■□□□□ 0.53
COCHO43405 AC079776.2-201ENST00000641154 1609 ntBASIC18.39■□□□□ 0.53
COCHO43405 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COCHO43405 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COCHO43405 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COCHO43405 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COCHO43405 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COCHO43405 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COCHO43405 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COCHO43405 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.39■□□□□ 0.53
COCHO43405 RPS2P1-201ENST00000434010 821 ntBASIC18.39■□□□□ 0.53
COCHO43405 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COCHO43405 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COCHO43405 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.39■□□□□ 0.53
COCHO43405 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.39■□□□□ 0.53
COCHO43405 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.39■□□□□ 0.53
COCHO43405 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
COCHO43405 IL9RP2-201ENST00000423948 1312 ntBASIC18.39■□□□□ 0.53
COCHO43405 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
COCHO43405 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.39■□□□□ 0.53
COCHO43405 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.39■□□□□ 0.53
COCHO43405 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COCHO43405 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COCHO43405 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.39■□□□□ 0.53
COCHO43405 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COCHO43405 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.39■□□□□ 0.53
COCHO43405 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
COCHO43405 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COCHO43405 BICD1-207ENST00000551848 1962 ntBASIC18.39■□□□□ 0.53
COCHO43405 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COCHO43405 AL049757.1-201ENST00000616842 1596 ntBASIC18.38■□□□□ 0.53
COCHO43405 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
COCHO43405 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COCHO43405 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.38■□□□□ 0.53
COCHO43405 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COCHO43405 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.38■□□□□ 0.53
COCHO43405 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COCHO43405 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.38■□□□□ 0.53
COCHO43405 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COCHO43405 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
COCHO43405 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COCHO43405 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
COCHO43405 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.38■□□□□ 0.53
COCHO43405 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.38■□□□□ 0.53
COCHO43405 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COCHO43405 DDX43P3-201ENST00000441064 443 ntBASIC18.38■□□□□ 0.53
COCHO43405 BX005266.1-201ENST00000473402 457 ntBASIC18.38■□□□□ 0.53
COCHO43405 AC093909.1-201ENST00000504731 1122 ntBASIC18.38■□□□□ 0.53
COCHO43405 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.38■□□□□ 0.53
COCHO43405 MTDHP4-201ENST00000600287 670 ntBASIC18.38■□□□□ 0.53
COCHO43405 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COCHO43405 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
COCHO43405 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COCHO43405 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COCHO43405 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COCHO43405 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COCHO43405 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COCHO43405 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COCHO43405 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COCHO43405 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.37■□□□□ 0.53
COCHO43405 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
COCHO43405 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
COCHO43405 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COCHO43405 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
COCHO43405 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.37■□□□□ 0.53
COCHO43405 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COCHO43405 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms