Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC24.37■■□□□ 1.49
MSH5O43196 UBE2V1P12-201ENST00000503954 474 ntBASIC24.37■■□□□ 1.49
MSH5O43196 AC009630.2-201ENST00000524133 570 ntTSL 5 BASIC24.37■■□□□ 1.49
MSH5O43196 PNN-202ENST00000553331 656 ntTSL 3 BASIC24.37■■□□□ 1.49
MSH5O43196 AC091304.2-201ENST00000564639 760 ntBASIC24.37■■□□□ 1.49
MSH5O43196 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC24.37■■□□□ 1.49
MSH5O43196 AC009630.2-202ENST00000578500 884 ntTSL 3 BASIC24.37■■□□□ 1.49
MSH5O43196 AP001094.1-201ENST00000579805 193 ntBASIC24.37■■□□□ 1.49
MSH5O43196 MIR4674-201ENST00000582457 87 ntBASIC24.37■■□□□ 1.49
MSH5O43196 LINC01711-201ENST00000598340 967 ntBASIC24.37■■□□□ 1.49
MSH5O43196 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
MSH5O43196 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC24.37■■□□□ 1.49
MSH5O43196 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
MSH5O43196 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
MSH5O43196 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
MSH5O43196 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC24.37■■□□□ 1.49
MSH5O43196 KRT18P1-202ENST00000452408 1331 ntBASIC24.36■■□□□ 1.49
MSH5O43196 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
MSH5O43196 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
MSH5O43196 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MSH5O43196 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
MSH5O43196 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MSH5O43196 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC24.36■■□□□ 1.49
MSH5O43196 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
MSH5O43196 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
MSH5O43196 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MSH5O43196 HNRNPDP2-201ENST00000406475 478 ntBASIC24.36■■□□□ 1.49
MSH5O43196 MTND2P2-201ENST00000434633 945 ntBASIC24.36■■□□□ 1.49
MSH5O43196 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC24.36■■□□□ 1.49
MSH5O43196 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC24.36■■□□□ 1.49
MSH5O43196 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
MSH5O43196 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
MSH5O43196 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC24.36■■□□□ 1.49
MSH5O43196 AC079598.2-201ENST00000599191 1294 ntBASIC24.36■■□□□ 1.49
MSH5O43196 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
MSH5O43196 AC104692.2-201ENST00000603054 253 ntBASIC24.36■■□□□ 1.49
MSH5O43196 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC24.36■■□□□ 1.49
MSH5O43196 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
MSH5O43196 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MSH5O43196 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC24.36■■□□□ 1.49
MSH5O43196 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC24.36■■□□□ 1.49
MSH5O43196 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
MSH5O43196 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MSH5O43196 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
MSH5O43196 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC24.35■■□□□ 1.49
MSH5O43196 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC24.35■■□□□ 1.49
MSH5O43196 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
MSH5O43196 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
MSH5O43196 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MSH5O43196 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
MSH5O43196 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
MSH5O43196 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC24.35■■□□□ 1.49
MSH5O43196 MTND4P10-201ENST00000446199 1363 ntBASIC24.35■■□□□ 1.49
MSH5O43196 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC24.35■■□□□ 1.49
MSH5O43196 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MSH5O43196 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
MSH5O43196 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
MSH5O43196 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC24.35■■□□□ 1.49
MSH5O43196 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC24.35■■□□□ 1.49
MSH5O43196 LINC02434-201ENST00000502419 677 ntTSL 3 BASIC24.35■■□□□ 1.49
MSH5O43196 AP000867.3-201ENST00000524675 377 ntBASIC24.35■■□□□ 1.49
MSH5O43196 AC004816.1-202ENST00000557691 629 ntTSL 2 BASIC24.35■■□□□ 1.49
MSH5O43196 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC24.35■■□□□ 1.49
MSH5O43196 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC24.35■■□□□ 1.49
MSH5O43196 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
MSH5O43196 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
MSH5O43196 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MSH5O43196 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
MSH5O43196 AC006333.2-201ENST00000607957 2099 ntBASIC24.34■■□□□ 1.49
MSH5O43196 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
MSH5O43196 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
MSH5O43196 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC24.34■■□□□ 1.49
MSH5O43196 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC24.34■■□□□ 1.49
MSH5O43196 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
MSH5O43196 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
MSH5O43196 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
MSH5O43196 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
MSH5O43196 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC24.34■■□□□ 1.49
MSH5O43196 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC24.34■■□□□ 1.49
MSH5O43196 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
MSH5O43196 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC24.34■■□□□ 1.49
MSH5O43196 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
MSH5O43196 ACP1-203ENST00000405233 1149 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
MSH5O43196 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
MSH5O43196 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
MSH5O43196 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC24.34■■□□□ 1.49
MSH5O43196 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC24.34■■□□□ 1.49
MSH5O43196 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC24.34■■□□□ 1.49
MSH5O43196 RN7SKP157-201ENST00000516174 282 ntBASIC24.34■■□□□ 1.49
MSH5O43196 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC24.34■■□□□ 1.49
MSH5O43196 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
MSH5O43196 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
MSH5O43196 AL512324.3-201ENST00000619383 882 ntBASIC24.34■■□□□ 1.49
MSH5O43196 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
MSH5O43196 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC24.34■■□□□ 1.49
MSH5O43196 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC24.34■■□□□ 1.49
MSH5O43196 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC24.34■■□□□ 1.49
MSH5O43196 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
MSH5O43196 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
MSH5O43196 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms