Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC24.61■■□□□ 1.53
CHD2O14647 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC24.61■■□□□ 1.53
CHD2O14647 SP100-208ENST00000427101 1922 ntTSL 2 BASIC24.61■■□□□ 1.53
CHD2O14647 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHD2O14647 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC24.61■■□□□ 1.53
CHD2O14647 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC24.61■■□□□ 1.53
CHD2O14647 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC24.61■■□□□ 1.53
CHD2O14647 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CHD2O14647 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC24.61■■□□□ 1.53
CHD2O14647 VPS29-207ENST00000549970 818 ntTSL 3 BASIC24.61■■□□□ 1.53
CHD2O14647 DUX4L27-201ENST00000554796 1261 ntBASIC24.61■■□□□ 1.53
CHD2O14647 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC24.61■■□□□ 1.53
CHD2O14647 REXO1L3P-201ENST00000622202 1288 ntBASIC24.61■■□□□ 1.53
CHD2O14647 HFE2-206ENST00000634927 506 ntTSL 4 BASIC24.61■■□□□ 1.53
CHD2O14647 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC24.6■■□□□ 1.53
CHD2O14647 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHD2O14647 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHD2O14647 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CHD2O14647 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHD2O14647 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHD2O14647 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHD2O14647 AC097637.2-201ENST00000624096 1997 ntBASIC24.6■■□□□ 1.53
CHD2O14647 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHD2O14647 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CHD2O14647 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHD2O14647 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHD2O14647 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHD2O14647 PHGDH-209ENST00000641074 1780 ntBASIC24.6■■□□□ 1.53
CHD2O14647 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC24.6■■□□□ 1.53
CHD2O14647 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC24.6■■□□□ 1.53
CHD2O14647 MEIS3P1-201ENST00000495167 958 ntBASIC24.6■■□□□ 1.53
CHD2O14647 POLD4-211ENST00000539074 714 ntTSL 3 BASIC24.6■■□□□ 1.53
CHD2O14647 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC24.6■■□□□ 1.53
CHD2O14647 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC24.6■■□□□ 1.53
CHD2O14647 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC24.6■■□□□ 1.53
CHD2O14647 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHD2O14647 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
CHD2O14647 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
CHD2O14647 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC24.6■■□□□ 1.53
CHD2O14647 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CHD2O14647 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
CHD2O14647 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHD2O14647 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CHD2O14647 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
CHD2O14647 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CHD2O14647 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHD2O14647 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
CHD2O14647 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC24.6■■□□□ 1.53
CHD2O14647 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHD2O14647 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHD2O14647 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHD2O14647 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC24.59■■□□□ 1.53
CHD2O14647 AL513480.1-201ENST00000451731 511 ntBASIC24.59■■□□□ 1.53
CHD2O14647 TIMM8BP1-201ENST00000452384 211 ntBASIC24.59■■□□□ 1.53
CHD2O14647 UGT1A2P-201ENST00000454886 866 ntBASIC24.59■■□□□ 1.53
CHD2O14647 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC24.59■■□□□ 1.53
CHD2O14647 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHD2O14647 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC24.59■■□□□ 1.53
CHD2O14647 RN7SL204P-201ENST00000582831 262 ntBASIC24.59■■□□□ 1.53
CHD2O14647 CYP51A1P2-201ENST00000419457 1499 ntBASIC24.59■■□□□ 1.53
CHD2O14647 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHD2O14647 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHD2O14647 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHD2O14647 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHD2O14647 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CHD2O14647 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC24.58■■□□□ 1.53
CHD2O14647 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHD2O14647 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHD2O14647 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHD2O14647 AL355306.1-201ENST00000415580 579 ntBASIC24.58■■□□□ 1.53
CHD2O14647 GPS2P2-201ENST00000430745 888 ntBASIC24.58■■□□□ 1.53
CHD2O14647 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC24.58■■□□□ 1.53
CHD2O14647 SPDYE11-202ENST00000450699 704 ntBASIC24.58■■□□□ 1.53
CHD2O14647 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CHD2O14647 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC24.58■■□□□ 1.53
CHD2O14647 SPDYE9P-201ENST00000570642 692 ntBASIC24.58■■□□□ 1.53
CHD2O14647 SPDYE10P-202ENST00000612005 668 ntBASIC24.58■■□□□ 1.53
CHD2O14647 ACTL9-202ENST00000612068 1252 ntBASIC24.58■■□□□ 1.53
CHD2O14647 SPDYE8P-202ENST00000612377 668 ntBASIC24.58■■□□□ 1.53
CHD2O14647 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC24.58■■□□□ 1.53
CHD2O14647 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC24.58■■□□□ 1.53
CHD2O14647 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHD2O14647 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHD2O14647 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CHD2O14647 PC-208ENST00000529047 1607 ntTSL 3 BASIC24.58■■□□□ 1.53
CHD2O14647 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHD2O14647 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHD2O14647 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHD2O14647 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC24.58■■□□□ 1.53
CHD2O14647 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
CHD2O14647 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC24.58■■□□□ 1.53
CHD2O14647 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC24.58■■□□□ 1.53
CHD2O14647 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC24.58■■□□□ 1.53
CHD2O14647 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.53
CHD2O14647 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CHD2O14647 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHD2O14647 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC24.58■■□□□ 1.52
CHD2O14647 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CHD2O14647 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC24.57■■□□□ 1.52
CHD2O14647 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms