Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 LINC00167-201ENST00000530583 1419 ntBASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 AC128688.1-201ENST00000487626 519 ntBASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 KRT17P2-201ENST00000300992 1314 ntBASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CHMP2BQ9UQN3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 MIR3917-201ENST00000580971 93 ntBASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 AC010947.1-201ENST00000623454 693 ntBASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 AC133963.1-201ENST00000504166 1679 ntBASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
CHMP2BQ9UQN3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
CHMP2BQ9UQN3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
CHMP2BQ9UQN3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 LINC00602-201ENST00000629776 2065 ntBASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2BQ9UQN3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms