Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX11Q96FC9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.24■□□□□ 0.99
DDX11Q96FC9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX11Q96FC9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
DDX11Q96FC9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
DDX11Q96FC9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
DDX11Q96FC9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX11Q96FC9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX11Q96FC9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX11Q96FC9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX11Q96FC9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.24■□□□□ 0.99
DDX11Q96FC9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX11Q96FC9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.24■□□□□ 0.99
DDX11Q96FC9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX11Q96FC9 Z83836.1-201ENST00000624605 1642 ntBASIC21.23■□□□□ 0.99
DDX11Q96FC9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
DDX11Q96FC9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX11Q96FC9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX11Q96FC9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.23■□□□□ 0.99
DDX11Q96FC9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.23■□□□□ 0.99
DDX11Q96FC9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX11Q96FC9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.23■□□□□ 0.99
DDX11Q96FC9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.23■□□□□ 0.99
DDX11Q96FC9 AP003733.1-201ENST00000491725 852 ntBASIC21.23■□□□□ 0.99
DDX11Q96FC9 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.23■□□□□ 0.99
DDX11Q96FC9 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX11Q96FC9 MIR3180-4-201ENST00000582223 153 ntBASIC21.23■□□□□ 0.99
DDX11Q96FC9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.23■□□□□ 0.99
DDX11Q96FC9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.23■□□□□ 0.99
DDX11Q96FC9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
DDX11Q96FC9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
DDX11Q96FC9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.23■□□□□ 0.99
DDX11Q96FC9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX11Q96FC9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX11Q96FC9 FLJ13224-201ENST00000313737 1514 ntBASIC21.23■□□□□ 0.99
DDX11Q96FC9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX11Q96FC9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
DDX11Q96FC9 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.23■□□□□ 0.99
DDX11Q96FC9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX11Q96FC9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX11Q96FC9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX11Q96FC9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
DDX11Q96FC9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX11Q96FC9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.22■□□□□ 0.99
DDX11Q96FC9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX11Q96FC9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.22■□□□□ 0.99
DDX11Q96FC9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC21.22■□□□□ 0.99
DDX11Q96FC9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX11Q96FC9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
DDX11Q96FC9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX11Q96FC9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.22■□□□□ 0.99
DDX11Q96FC9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX11Q96FC9 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX11Q96FC9 AC004870.1-201ENST00000315132 882 ntBASIC21.22■□□□□ 0.99
DDX11Q96FC9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX11Q96FC9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
DDX11Q96FC9 AL845331.1-201ENST00000424978 1190 ntBASIC21.22■□□□□ 0.99
DDX11Q96FC9 PVRIG2P-201ENST00000435460 978 ntBASIC21.22■□□□□ 0.99
DDX11Q96FC9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.22■□□□□ 0.99
DDX11Q96FC9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.22■□□□□ 0.99
DDX11Q96FC9 LINC00265-3P-201ENST00000447588 903 ntBASIC21.22■□□□□ 0.99
DDX11Q96FC9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.22■□□□□ 0.99
DDX11Q96FC9 AP000867.3-201ENST00000524675 377 ntBASIC21.22■□□□□ 0.99
DDX11Q96FC9 AC009065.1-201ENST00000564055 1225 ntBASIC21.22■□□□□ 0.99
DDX11Q96FC9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX11Q96FC9 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX11Q96FC9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
DDX11Q96FC9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX11Q96FC9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX11Q96FC9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
DDX11Q96FC9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX11Q96FC9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX11Q96FC9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
DDX11Q96FC9 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX11Q96FC9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DDX11Q96FC9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX11Q96FC9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX11Q96FC9 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.21■□□□□ 0.99
DDX11Q96FC9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
DDX11Q96FC9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX11Q96FC9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.21■□□□□ 0.99
DDX11Q96FC9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DDX11Q96FC9 DRAXINP1-201ENST00000437611 948 ntBASIC21.21■□□□□ 0.99
DDX11Q96FC9 UNC93B7-201ENST00000509439 705 ntBASIC21.21■□□□□ 0.99
DDX11Q96FC9 TPSP2-201ENST00000561760 610 ntBASIC21.21■□□□□ 0.99
DDX11Q96FC9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.21■□□□□ 0.99
DDX11Q96FC9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
DDX11Q96FC9 AC005332.3-201ENST00000589904 676 ntBASIC21.21■□□□□ 0.99
DDX11Q96FC9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.21■□□□□ 0.99
DDX11Q96FC9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX11Q96FC9 AC093010.1-201ENST00000473625 1624 ntBASIC21.21■□□□□ 0.99
DDX11Q96FC9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.21■□□□□ 0.99
DDX11Q96FC9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX11Q96FC9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DDX11Q96FC9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX11Q96FC9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX11Q96FC9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
DDX11Q96FC9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
DDX11Q96FC9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.2■□□□□ 0.99
DDX11Q96FC9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms