Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 GPALPP1-207ENST00000611650 899 ntBASIC18.18■□□□□ 0.5
CHPFQ8IZ52 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHPFQ8IZ52 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 AC243591.1-201ENST00000452967 1364 ntBASIC18.17■□□□□ 0.5
CHPFQ8IZ52 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 MIR574-201ENST00000385209 96 ntBASIC18.17■□□□□ 0.5
CHPFQ8IZ52 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 AC139887.3-201ENST00000568585 713 ntBASIC18.17■□□□□ 0.5
CHPFQ8IZ52 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 AL049840.3-201ENST00000602669 611 ntBASIC18.17■□□□□ 0.5
CHPFQ8IZ52 AL671883.3-201ENST00000603274 991 ntBASIC18.17■□□□□ 0.5
CHPFQ8IZ52 MIR7706-201ENST00000613747 67 ntBASIC18.17■□□□□ 0.5
CHPFQ8IZ52 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.17■□□□□ 0.5
CHPFQ8IZ52 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 FAM215A-202ENST00000632077 792 ntBASIC18.17■□□□□ 0.5
CHPFQ8IZ52 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHPFQ8IZ52 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 AC009113.1-201ENST00000570267 2443 ntBASIC18.16■□□□□ 0.5
CHPFQ8IZ52 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 AL031598.1-201ENST00000561511 1773 ntBASIC18.16■□□□□ 0.5
CHPFQ8IZ52 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.16■□□□□ 0.5
CHPFQ8IZ52 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHPFQ8IZ52 AC132938.6-201ENST00000623828 1655 ntBASIC18.15■□□□□ 0.5
CHPFQ8IZ52 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms