Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VARS2Q5ST30 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
VARS2Q5ST30 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.89■□□□□ 0.61
VARS2Q5ST30 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VARS2Q5ST30 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VARS2Q5ST30 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VARS2Q5ST30 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VARS2Q5ST30 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VARS2Q5ST30 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
VARS2Q5ST30 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VARS2Q5ST30 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
VARS2Q5ST30 COX5BP2-201ENST00000392354 334 ntBASIC18.88■□□□□ 0.61
VARS2Q5ST30 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.88■□□□□ 0.61
VARS2Q5ST30 AC092865.5-201ENST00000545435 363 ntBASIC18.88■□□□□ 0.61
VARS2Q5ST30 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.88■□□□□ 0.61
VARS2Q5ST30 AD001527.2-201ENST00000622994 785 ntBASIC18.88■□□□□ 0.61
VARS2Q5ST30 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.88■□□□□ 0.61
VARS2Q5ST30 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VARS2Q5ST30 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.88■□□□□ 0.61
VARS2Q5ST30 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VARS2Q5ST30 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VARS2Q5ST30 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.88■□□□□ 0.61
VARS2Q5ST30 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
VARS2Q5ST30 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.88■□□□□ 0.61
VARS2Q5ST30 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VARS2Q5ST30 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VARS2Q5ST30 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
VARS2Q5ST30 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VARS2Q5ST30 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.87■□□□□ 0.61
VARS2Q5ST30 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VARS2Q5ST30 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.87■□□□□ 0.61
VARS2Q5ST30 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.87■□□□□ 0.61
VARS2Q5ST30 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.87■□□□□ 0.61
VARS2Q5ST30 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
VARS2Q5ST30 SERPINA7P1-201ENST00000443077 631 ntBASIC18.87■□□□□ 0.61
VARS2Q5ST30 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VARS2Q5ST30 OR7E14P-202ENST00000530490 1290 ntBASIC18.87■□□□□ 0.61
VARS2Q5ST30 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.87■□□□□ 0.61
VARS2Q5ST30 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
VARS2Q5ST30 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.87■□□□□ 0.61
VARS2Q5ST30 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VARS2Q5ST30 MTDHP4-201ENST00000600287 670 ntBASIC18.87■□□□□ 0.61
VARS2Q5ST30 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
VARS2Q5ST30 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VARS2Q5ST30 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VARS2Q5ST30 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VARS2Q5ST30 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
VARS2Q5ST30 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VARS2Q5ST30 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.86■□□□□ 0.61
VARS2Q5ST30 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VARS2Q5ST30 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VARS2Q5ST30 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.86■□□□□ 0.61
VARS2Q5ST30 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.86■□□□□ 0.61
VARS2Q5ST30 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.86■□□□□ 0.61
VARS2Q5ST30 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VARS2Q5ST30 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.86■□□□□ 0.61
VARS2Q5ST30 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VARS2Q5ST30 AC079776.2-201ENST00000641154 1609 ntBASIC18.86■□□□□ 0.61
VARS2Q5ST30 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VARS2Q5ST30 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.86■□□□□ 0.61
VARS2Q5ST30 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.86■□□□□ 0.61
VARS2Q5ST30 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.86■□□□□ 0.61
VARS2Q5ST30 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
VARS2Q5ST30 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VARS2Q5ST30 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VARS2Q5ST30 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VARS2Q5ST30 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.86■□□□□ 0.61
VARS2Q5ST30 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.86■□□□□ 0.61
VARS2Q5ST30 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VARS2Q5ST30 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.86■□□□□ 0.61
VARS2Q5ST30 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.86■□□□□ 0.61
VARS2Q5ST30 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.86■□□□□ 0.61
VARS2Q5ST30 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VARS2Q5ST30 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VARS2Q5ST30 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VARS2Q5ST30 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.86■□□□□ 0.61
VARS2Q5ST30 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VARS2Q5ST30 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.86■□□□□ 0.61
VARS2Q5ST30 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
VARS2Q5ST30 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VARS2Q5ST30 AC100803.2-201ENST00000562459 1963 ntBASIC18.86■□□□□ 0.61
VARS2Q5ST30 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.86■□□□□ 0.61
VARS2Q5ST30 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.86■□□□□ 0.61
VARS2Q5ST30 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VARS2Q5ST30 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
VARS2Q5ST30 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VARS2Q5ST30 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VARS2Q5ST30 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
VARS2Q5ST30 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VARS2Q5ST30 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.85■□□□□ 0.61
VARS2Q5ST30 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VARS2Q5ST30 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.85■□□□□ 0.61
VARS2Q5ST30 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VARS2Q5ST30 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VARS2Q5ST30 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VARS2Q5ST30 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.85■□□□□ 0.61
VARS2Q5ST30 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
VARS2Q5ST30 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VARS2Q5ST30 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VARS2Q5ST30 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms