Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 AC098831.1-202ENST00000438821 336 ntBASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 AC008735.5-201ENST00000623544 497 ntBASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.05■□□□□ 0.16
RNFT1Q5M7Z0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 TNXA-203ENST00000507684 2038 ntBASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 AC104109.2-201ENST00000602919 1418 ntBASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 COX5BP2-201ENST00000392354 334 ntBASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 AC145285.3-201ENST00000564603 959 ntBASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 AC117500.6-201ENST00000624871 588 ntBASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 AC107918.4-202ENST00000641623 219 ntBASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 SIRPAP1-201ENST00000448467 1770 ntBASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 AC100803.2-201ENST00000562459 1963 ntBASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNFT1Q5M7Z0 AP002414.3-201ENST00000589352 1468 ntBASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 BX323043.1-201ENST00000641006 1765 ntBASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 ZNF259P1-201ENST00000407656 1365 ntBASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 AC087289.5-201ENST00000586076 3175 ntBASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
RNFT1Q5M7Z0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms