Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 FLJ13224-201ENST00000313737 1514 ntBASIC16.33■□□□□ 0.2
PUDPQ08623 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PUDPQ08623 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PUDPQ08623 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PUDPQ08623 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PUDPQ08623 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.33■□□□□ 0.2
PUDPQ08623 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PUDPQ08623 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PUDPQ08623 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PUDPQ08623 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PUDPQ08623 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PUDPQ08623 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PUDPQ08623 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PUDPQ08623 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PUDPQ08623 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PUDPQ08623 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PUDPQ08623 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PUDPQ08623 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PUDPQ08623 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.32■□□□□ 0.2
PUDPQ08623 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.32■□□□□ 0.2
PUDPQ08623 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PUDPQ08623 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PUDPQ08623 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PUDPQ08623 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.32■□□□□ 0.2
PUDPQ08623 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.32■□□□□ 0.2
PUDPQ08623 BX664615.1-201ENST00000443558 458 ntBASIC16.32■□□□□ 0.2
PUDPQ08623 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PUDPQ08623 AC093010.1-201ENST00000473625 1624 ntBASIC16.32■□□□□ 0.2
PUDPQ08623 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PUDPQ08623 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PUDPQ08623 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PUDPQ08623 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.32■□□□□ 0.2
PUDPQ08623 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.32■□□□□ 0.2
PUDPQ08623 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.32■□□□□ 0.2
PUDPQ08623 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.32■□□□□ 0.2
PUDPQ08623 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PUDPQ08623 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PUDPQ08623 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PUDPQ08623 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.32■□□□□ 0.2
PUDPQ08623 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PUDPQ08623 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PUDPQ08623 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PUDPQ08623 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.31■□□□□ 0.2
PUDPQ08623 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.31■□□□□ 0.2
PUDPQ08623 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.31■□□□□ 0.2
PUDPQ08623 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.31■□□□□ 0.2
PUDPQ08623 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
PUDPQ08623 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.31■□□□□ 0.2
PUDPQ08623 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PUDPQ08623 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.31■□□□□ 0.2
PUDPQ08623 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.31■□□□□ 0.2
PUDPQ08623 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.31■□□□□ 0.2
PUDPQ08623 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.31■□□□□ 0.2
PUDPQ08623 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.31■□□□□ 0.2
PUDPQ08623 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.31■□□□□ 0.2
PUDPQ08623 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.31■□□□□ 0.2
PUDPQ08623 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PUDPQ08623 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PUDPQ08623 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PUDPQ08623 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PUDPQ08623 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PUDPQ08623 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PUDPQ08623 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
PUDPQ08623 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PUDPQ08623 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PUDPQ08623 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PUDPQ08623 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.3■□□□□ 0.2
PUDPQ08623 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.3■□□□□ 0.2
PUDPQ08623 AC073508.3-201ENST00000619697 1419 ntBASIC16.3■□□□□ 0.2
PUDPQ08623 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.3■□□□□ 0.2
PUDPQ08623 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PUDPQ08623 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PUDPQ08623 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.3■□□□□ 0.2
PUDPQ08623 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PUDPQ08623 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PUDPQ08623 AC005521.1-201ENST00000393351 872 ntBASIC16.3■□□□□ 0.2
PUDPQ08623 AL441883.1-201ENST00000566170 1045 ntBASIC16.3■□□□□ 0.2
PUDPQ08623 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PUDPQ08623 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms