Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 RNA5SP415-201ENST00000517246 115 ntBASIC20.76■□□□□ 0.91
IRX3P78415 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.76■□□□□ 0.91
IRX3P78415 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.76■□□□□ 0.91
IRX3P78415 AC034105.1-201ENST00000563488 319 ntBASIC20.76■□□□□ 0.91
IRX3P78415 NKAPP1-205ENST00000585790 367 ntBASIC20.76■□□□□ 0.91
IRX3P78415 MTDHP4-201ENST00000600287 670 ntBASIC20.76■□□□□ 0.91
IRX3P78415 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IRX3P78415 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IRX3P78415 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
IRX3P78415 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
IRX3P78415 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IRX3P78415 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IRX3P78415 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IRX3P78415 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.75■□□□□ 0.91
IRX3P78415 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
IRX3P78415 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IRX3P78415 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
IRX3P78415 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
IRX3P78415 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
IRX3P78415 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
IRX3P78415 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
IRX3P78415 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.75■□□□□ 0.91
IRX3P78415 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.75■□□□□ 0.91
IRX3P78415 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.75■□□□□ 0.91
IRX3P78415 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.75■□□□□ 0.91
IRX3P78415 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.75■□□□□ 0.91
IRX3P78415 AC005104.2-201ENST00000427818 678 ntBASIC20.75■□□□□ 0.91
IRX3P78415 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.75■□□□□ 0.91
IRX3P78415 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.75■□□□□ 0.91
IRX3P78415 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.75■□□□□ 0.91
IRX3P78415 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.75■□□□□ 0.91
IRX3P78415 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
IRX3P78415 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.75■□□□□ 0.91
IRX3P78415 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IRX3P78415 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
IRX3P78415 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
IRX3P78415 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IRX3P78415 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
IRX3P78415 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
IRX3P78415 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
IRX3P78415 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IRX3P78415 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
IRX3P78415 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.74■□□□□ 0.91
IRX3P78415 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.74■□□□□ 0.91
IRX3P78415 AL133373.2-201ENST00000623187 2828 ntBASIC20.74■□□□□ 0.91
IRX3P78415 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
IRX3P78415 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
IRX3P78415 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IRX3P78415 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IRX3P78415 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
IRX3P78415 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
IRX3P78415 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IRX3P78415 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.74■□□□□ 0.91
IRX3P78415 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.74■□□□□ 0.91
IRX3P78415 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
IRX3P78415 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.74■□□□□ 0.91
IRX3P78415 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.74■□□□□ 0.91
IRX3P78415 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.74■□□□□ 0.91
IRX3P78415 AC105339.3-201ENST00000560043 636 ntBASIC20.74■□□□□ 0.91
IRX3P78415 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
IRX3P78415 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
IRX3P78415 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
IRX3P78415 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IRX3P78415 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
IRX3P78415 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.74■□□□□ 0.91
IRX3P78415 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.74■□□□□ 0.91
IRX3P78415 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IRX3P78415 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
IRX3P78415 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IRX3P78415 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
IRX3P78415 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
IRX3P78415 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
IRX3P78415 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.73■□□□□ 0.91
IRX3P78415 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
IRX3P78415 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
IRX3P78415 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
IRX3P78415 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IRX3P78415 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IRX3P78415 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IRX3P78415 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
IRX3P78415 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.73■□□□□ 0.91
IRX3P78415 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
IRX3P78415 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.73■□□□□ 0.91
IRX3P78415 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.73■□□□□ 0.91
IRX3P78415 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.73■□□□□ 0.91
IRX3P78415 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
IRX3P78415 AL691403.2-201ENST00000618460 490 ntBASIC20.73■□□□□ 0.91
IRX3P78415 AC107918.4-202ENST00000641623 219 ntBASIC20.73■□□□□ 0.91
IRX3P78415 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.73■□□□□ 0.91
IRX3P78415 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
IRX3P78415 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IRX3P78415 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.73■□□□□ 0.91
IRX3P78415 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IRX3P78415 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
IRX3P78415 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IRX3P78415 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
IRX3P78415 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
IRX3P78415 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IRX3P78415 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.72■□□□□ 0.91
IRX3P78415 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms