Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 COX5BP2-201ENST00000392354 334 ntBASIC23.22■■□□□ 1.31
RXRBP28702 AC079776.1-201ENST00000401540 1152 ntBASIC23.22■■□□□ 1.31
RXRBP28702 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RXRBP28702 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
RXRBP28702 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC23.22■■□□□ 1.31
RXRBP28702 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC23.22■■□□□ 1.31
RXRBP28702 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC23.22■■□□□ 1.31
RXRBP28702 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
RXRBP28702 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC23.22■■□□□ 1.31
RXRBP28702 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC23.22■■□□□ 1.31
RXRBP28702 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
RXRBP28702 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RXRBP28702 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
RXRBP28702 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC23.22■■□□□ 1.31
RXRBP28702 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RXRBP28702 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RXRBP28702 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC23.21■■□□□ 1.31
RXRBP28702 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC23.21■■□□□ 1.31
RXRBP28702 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC23.21■■□□□ 1.31
RXRBP28702 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RXRBP28702 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC23.21■■□□□ 1.31
RXRBP28702 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RXRBP28702 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RXRBP28702 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RXRBP28702 MYLKP1-201ENST00000509077 1580 ntBASIC23.21■■□□□ 1.31
RXRBP28702 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC23.21■■□□□ 1.31
RXRBP28702 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RXRBP28702 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RXRBP28702 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
RXRBP28702 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RXRBP28702 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RXRBP28702 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
RXRBP28702 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RXRBP28702 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
RXRBP28702 AL049757.1-201ENST00000616842 1596 ntBASIC23.2■■□□□ 1.3
RXRBP28702 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RXRBP28702 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RXRBP28702 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC23.2■■□□□ 1.3
RXRBP28702 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC23.2■■□□□ 1.3
RXRBP28702 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
RXRBP28702 PACS1-203ENST00000524815 628 ntTSL 4 BASIC23.2■■□□□ 1.3
RXRBP28702 CDK4-206ENST00000549606 558 ntTSL 2 BASIC23.2■■□□□ 1.3
RXRBP28702 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC23.2■■□□□ 1.3
RXRBP28702 AL135744.1-201ENST00000565098 629 ntBASIC23.2■■□□□ 1.3
RXRBP28702 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC23.2■■□□□ 1.3
RXRBP28702 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC23.2■■□□□ 1.3
RXRBP28702 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
RXRBP28702 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC23.2■■□□□ 1.3
RXRBP28702 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC23.19■■□□□ 1.3
RXRBP28702 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RXRBP28702 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RXRBP28702 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC23.19■■□□□ 1.3
RXRBP28702 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC23.19■■□□□ 1.3
RXRBP28702 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC23.19■■□□□ 1.3
RXRBP28702 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC23.19■■□□□ 1.3
RXRBP28702 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RXRBP28702 ACTL9-202ENST00000612068 1252 ntBASIC23.19■■□□□ 1.3
RXRBP28702 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
RXRBP28702 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RXRBP28702 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RXRBP28702 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RXRBP28702 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC23.19■■□□□ 1.3
RXRBP28702 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RXRBP28702 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RXRBP28702 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RXRBP28702 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RXRBP28702 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC23.18■■□□□ 1.3
RXRBP28702 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.18■■□□□ 1.3
RXRBP28702 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RXRBP28702 TCF3P1-201ENST00000423021 1937 ntBASIC23.18■■□□□ 1.3
RXRBP28702 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC23.18■■□□□ 1.3
RXRBP28702 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RXRBP28702 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RXRBP28702 AC098614.1-201ENST00000368528 745 ntBASIC23.18■■□□□ 1.3
RXRBP28702 SPCS2P4-201ENST00000436160 681 ntBASIC23.18■■□□□ 1.3
RXRBP28702 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC23.18■■□□□ 1.3
RXRBP28702 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RXRBP28702 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
RXRBP28702 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC23.18■■□□□ 1.3
RXRBP28702 IGHV3-72-202ENST00000621503 303 ntBASIC23.18■■□□□ 1.3
RXRBP28702 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RXRBP28702 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RXRBP28702 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC23.18■■□□□ 1.3
RXRBP28702 AC097637.2-201ENST00000624096 1997 ntBASIC23.18■■□□□ 1.3
RXRBP28702 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
RXRBP28702 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RXRBP28702 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RXRBP28702 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RXRBP28702 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RXRBP28702 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RXRBP28702 AC140658.5-201ENST00000438532 169 ntBASIC23.17■■□□□ 1.3
RXRBP28702 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC23.17■■□□□ 1.3
RXRBP28702 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC23.17■■□□□ 1.3
RXRBP28702 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC23.17■■□□□ 1.3
RXRBP28702 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC23.17■■□□□ 1.3
RXRBP28702 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC23.17■■□□□ 1.3
RXRBP28702 MIR6080-201ENST00000617359 66 ntBASIC23.17■■□□□ 1.3
RXRBP28702 RETN-203ENST00000629642 400 ntTSL 5 BASIC23.17■■□□□ 1.3
RXRBP28702 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RXRBP28702 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms