Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.88■□□□□ 0.29
URB1O60287 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
URB1O60287 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
URB1O60287 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
URB1O60287 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
URB1O60287 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
URB1O60287 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.88■□□□□ 0.29
URB1O60287 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
URB1O60287 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.88■□□□□ 0.29
URB1O60287 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.88■□□□□ 0.29
URB1O60287 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.88■□□□□ 0.29
URB1O60287 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
URB1O60287 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
URB1O60287 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
URB1O60287 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
URB1O60287 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.88■□□□□ 0.29
URB1O60287 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
URB1O60287 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
URB1O60287 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
URB1O60287 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
URB1O60287 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
URB1O60287 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
URB1O60287 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
URB1O60287 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
URB1O60287 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
URB1O60287 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.87■□□□□ 0.29
URB1O60287 MTCL1P1-201ENST00000446207 792 ntBASIC16.87■□□□□ 0.29
URB1O60287 HCG4B-203ENST00000450128 991 ntBASIC16.87■□□□□ 0.29
URB1O60287 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
URB1O60287 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
URB1O60287 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.87■□□□□ 0.29
URB1O60287 AC006557.2-201ENST00000592985 1240 ntBASIC16.87■□□□□ 0.29
URB1O60287 AL513190.1-201ENST00000621254 727 ntBASIC16.87■□□□□ 0.29
URB1O60287 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
URB1O60287 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
URB1O60287 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.87■□□□□ 0.29
URB1O60287 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
URB1O60287 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
URB1O60287 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.87■□□□□ 0.29
URB1O60287 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
URB1O60287 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
URB1O60287 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
URB1O60287 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
URB1O60287 CRYGEP-201ENST00000412192 528 ntBASIC16.87■□□□□ 0.29
URB1O60287 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.87■□□□□ 0.29
URB1O60287 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
URB1O60287 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.87■□□□□ 0.29
URB1O60287 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
URB1O60287 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.87■□□□□ 0.29
URB1O60287 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.87■□□□□ 0.29
URB1O60287 AC004449.1-201ENST00000564240 433 ntBASIC16.87■□□□□ 0.29
URB1O60287 AC064836.3-201ENST00000607928 673 ntBASIC16.87■□□□□ 0.29
URB1O60287 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.87■□□□□ 0.29
URB1O60287 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
URB1O60287 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.87■□□□□ 0.29
URB1O60287 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
URB1O60287 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
URB1O60287 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.86■□□□□ 0.29
URB1O60287 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.86■□□□□ 0.29
URB1O60287 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
URB1O60287 AL139400.1-201ENST00000366220 510 ntBASIC16.86■□□□□ 0.29
URB1O60287 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
URB1O60287 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
URB1O60287 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.86■□□□□ 0.29
URB1O60287 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.86■□□□□ 0.29
URB1O60287 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.86■□□□□ 0.29
URB1O60287 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.86■□□□□ 0.29
URB1O60287 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
URB1O60287 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.86■□□□□ 0.29
URB1O60287 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
URB1O60287 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.86■□□□□ 0.29
URB1O60287 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.86■□□□□ 0.29
URB1O60287 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
URB1O60287 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
URB1O60287 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.86■□□□□ 0.29
URB1O60287 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
URB1O60287 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.86■□□□□ 0.29
URB1O60287 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
URB1O60287 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.86■□□□□ 0.29
URB1O60287 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.86■□□□□ 0.29
URB1O60287 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
URB1O60287 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.86■□□□□ 0.29
URB1O60287 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
URB1O60287 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
URB1O60287 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
URB1O60287 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
URB1O60287 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
URB1O60287 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.86■□□□□ 0.29
URB1O60287 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.86■□□□□ 0.29
URB1O60287 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.86■□□□□ 0.29
URB1O60287 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.86■□□□□ 0.29
URB1O60287 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.86■□□□□ 0.29
URB1O60287 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.86■□□□□ 0.29
URB1O60287 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.86■□□□□ 0.29
URB1O60287 PGM5P2-202ENST00000637225 1043 ntBASIC16.86■□□□□ 0.29
URB1O60287 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.86■□□□□ 0.29
URB1O60287 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
URB1O60287 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
URB1O60287 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
URB1O60287 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms