Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
TWNKQ96RR1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.97■□□□□ 0.63
TWNKQ96RR1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TWNKQ96RR1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
TWNKQ96RR1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TWNKQ96RR1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TWNKQ96RR1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TWNKQ96RR1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TWNKQ96RR1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
TWNKQ96RR1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TWNKQ96RR1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
TWNKQ96RR1 AC096633.1-201ENST00000422446 749 ntBASIC18.97■□□□□ 0.63
TWNKQ96RR1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.97■□□□□ 0.63
TWNKQ96RR1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.97■□□□□ 0.63
TWNKQ96RR1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TWNKQ96RR1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.97■□□□□ 0.63
TWNKQ96RR1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.97■□□□□ 0.63
TWNKQ96RR1 MIR3652-201ENST00000579335 131 ntBASIC18.97■□□□□ 0.63
TWNKQ96RR1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.97■□□□□ 0.63
TWNKQ96RR1 AC099336.1-202ENST00000602961 463 ntBASIC18.97■□□□□ 0.63
TWNKQ96RR1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TWNKQ96RR1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TWNKQ96RR1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TWNKQ96RR1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TWNKQ96RR1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TWNKQ96RR1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.97■□□□□ 0.63
TWNKQ96RR1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TWNKQ96RR1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
TWNKQ96RR1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TWNKQ96RR1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TWNKQ96RR1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TWNKQ96RR1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
TWNKQ96RR1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.96■□□□□ 0.63
TWNKQ96RR1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TWNKQ96RR1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.96■□□□□ 0.63
TWNKQ96RR1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TWNKQ96RR1 AC007967.3-201ENST00000434308 558 ntBASIC18.96■□□□□ 0.63
TWNKQ96RR1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.96■□□□□ 0.63
TWNKQ96RR1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.96■□□□□ 0.63
TWNKQ96RR1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
TWNKQ96RR1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.96■□□□□ 0.63
TWNKQ96RR1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.96■□□□□ 0.63
TWNKQ96RR1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.96■□□□□ 0.63
TWNKQ96RR1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.96■□□□□ 0.63
TWNKQ96RR1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.96■□□□□ 0.63
TWNKQ96RR1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TWNKQ96RR1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.96■□□□□ 0.63
TWNKQ96RR1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.96■□□□□ 0.63
TWNKQ96RR1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TWNKQ96RR1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.96■□□□□ 0.63
TWNKQ96RR1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TWNKQ96RR1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TWNKQ96RR1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TWNKQ96RR1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TWNKQ96RR1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TWNKQ96RR1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.95■□□□□ 0.62
TWNKQ96RR1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.95■□□□□ 0.62
TWNKQ96RR1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TWNKQ96RR1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.95■□□□□ 0.62
TWNKQ96RR1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TWNKQ96RR1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TWNKQ96RR1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TWNKQ96RR1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.95■□□□□ 0.62
TWNKQ96RR1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TWNKQ96RR1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TWNKQ96RR1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.95■□□□□ 0.62
TWNKQ96RR1 SLC25A6P5-201ENST00000435663 894 ntBASIC18.95■□□□□ 0.62
TWNKQ96RR1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TWNKQ96RR1 MINOS1P3-201ENST00000457048 203 ntBASIC18.95■□□□□ 0.62
TWNKQ96RR1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
TWNKQ96RR1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.95■□□□□ 0.62
TWNKQ96RR1 AC138894.3-201ENST00000603787 634 ntBASIC18.95■□□□□ 0.62
TWNKQ96RR1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.95■□□□□ 0.62
TWNKQ96RR1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.95■□□□□ 0.62
TWNKQ96RR1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TWNKQ96RR1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TWNKQ96RR1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TWNKQ96RR1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TWNKQ96RR1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TWNKQ96RR1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms