Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 MESTP1-201ENST00000404287 994 ntBASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 MFAP1P1-201ENST00000442257 1255 ntBASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NSMCE2Q96MF7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 CA15P1-201ENST00000481698 905 ntBASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 SLC25A1P4-201ENST00000567977 778 ntBASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NSMCE2Q96MF7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 LINC00304-203ENST00000565008 1864 ntBASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 FER1L4-210ENST00000615531 5998 ntBASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 MIR4674-201ENST00000582457 87 ntBASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NSMCE2Q96MF7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.89■□□□□ 0.3
NSMCE2Q96MF7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
NSMCE2Q96MF7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms