Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
VPS33AQ96AX1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.23■□□□□ 0.35
VPS33AQ96AX1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 AC104390.1-201ENST00000555663 520 ntBASIC17.23■□□□□ 0.35
VPS33AQ96AX1 AL353719.1-201ENST00000566847 864 ntBASIC17.23■□□□□ 0.35
VPS33AQ96AX1 AP005242.2-201ENST00000580065 1175 ntBASIC17.23■□□□□ 0.35
VPS33AQ96AX1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 AC112497.1-201ENST00000624824 639 ntBASIC17.23■□□□□ 0.35
VPS33AQ96AX1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS33AQ96AX1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 AC233702.5-201ENST00000584107 538 ntBASIC17.22■□□□□ 0.35
VPS33AQ96AX1 AC026471.5-201ENST00000615068 467 ntBASIC17.22■□□□□ 0.35
VPS33AQ96AX1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 LINC00602-201ENST00000629776 2065 ntBASIC17.22■□□□□ 0.35
VPS33AQ96AX1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
VPS33AQ96AX1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.21■□□□□ 0.35
VPS33AQ96AX1 AC012618.2-201ENST00000428058 849 ntBASIC17.21■□□□□ 0.35
VPS33AQ96AX1 SLC25A1P2-201ENST00000430693 912 ntBASIC17.21■□□□□ 0.35
VPS33AQ96AX1 GCSHP5-201ENST00000443090 522 ntBASIC17.21■□□□□ 0.35
VPS33AQ96AX1 AL158047.1-201ENST00000445918 881 ntBASIC17.21■□□□□ 0.35
VPS33AQ96AX1 TSPY17P-201ENST00000450329 467 ntBASIC17.21■□□□□ 0.35
VPS33AQ96AX1 AC009065.1-201ENST00000564055 1225 ntBASIC17.21■□□□□ 0.35
VPS33AQ96AX1 AP001412.1-201ENST00000608405 714 ntBASIC17.21■□□□□ 0.35
VPS33AQ96AX1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms