Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 AC128676.1-201ENST00000454392 318 ntBASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 TNRC18P3-201ENST00000441896 2691 ntBASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NUDCD3Q8IVD9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 AC116562.2-201ENST00000507042 360 ntBASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 CD177P1-201ENST00000606252 935 ntBASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUDCD3Q8IVD9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 AC092666.2-201ENST00000613287 246 ntBASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms