Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 TNXA-203ENST00000507684 2038 ntBASIC19.93■□□□□ 0.78
TRIM50Q86XT4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM50Q86XT4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 AC135776.1-201ENST00000319817 2481 ntBASIC19.91■□□□□ 0.78
TRIM50Q86XT4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 FAM220CP-201ENST00000395253 831 ntBASIC19.91■□□□□ 0.78
TRIM50Q86XT4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM50Q86XT4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 AC093677.2-201ENST00000600169 1863 ntBASIC19.9■□□□□ 0.78
TRIM50Q86XT4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 RPS2P1-201ENST00000434010 821 ntBASIC19.9■□□□□ 0.78
TRIM50Q86XT4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 SCARNA2-201ENST00000458748 420 ntBASIC19.9■□□□□ 0.78
TRIM50Q86XT4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 AC023511.2-201ENST00000618803 211 ntBASIC19.9■□□□□ 0.78
TRIM50Q86XT4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.9■□□□□ 0.78
TRIM50Q86XT4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM50Q86XT4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms