Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 AC005521.1-201ENST00000393351 872 ntBASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 AC010203.1-204ENST00000548782 407 ntBASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 MYC-208ENST00000641036 567 ntBASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 AL162727.3-201ENST00000635661 2787 ntBASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 TERF1P1-201ENST00000311003 1181 ntBASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 WWOX-216ENST00000569818 525 ntBASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF111Q6ZNA4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.38
RNF111Q6ZNA4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.39■□□□□ 0.38
RNF111Q6ZNA4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
RNF111Q6ZNA4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms