Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
USP46P62068 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.81■□□□□ 0.6
USP46P62068 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.81■□□□□ 0.6
USP46P62068 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.81■□□□□ 0.6
USP46P62068 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.81■□□□□ 0.6
USP46P62068 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.81■□□□□ 0.6
USP46P62068 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
USP46P62068 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.81■□□□□ 0.6
USP46P62068 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.81■□□□□ 0.6
USP46P62068 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
USP46P62068 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.81■□□□□ 0.6
USP46P62068 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 KRT8P10-201ENST00000450021 1447 ntBASIC18.81■□□□□ 0.6
USP46P62068 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.81■□□□□ 0.6
USP46P62068 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.8■□□□□ 0.6
USP46P62068 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.8■□□□□ 0.6
USP46P62068 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.8■□□□□ 0.6
USP46P62068 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
USP46P62068 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
USP46P62068 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.8■□□□□ 0.6
USP46P62068 AC132008.2-207ENST00000454517 770 ntBASIC18.8■□□□□ 0.6
USP46P62068 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.8■□□□□ 0.6
USP46P62068 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.8■□□□□ 0.6
USP46P62068 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
USP46P62068 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.8■□□□□ 0.6
USP46P62068 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
USP46P62068 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
USP46P62068 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP46P62068 KRT8P47-201ENST00000604727 1398 ntBASIC18.8■□□□□ 0.6
USP46P62068 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP46P62068 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP46P62068 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP46P62068 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP46P62068 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.79■□□□□ 0.6
USP46P62068 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.79■□□□□ 0.6
USP46P62068 INTS4P1-201ENST00000438455 1935 ntBASIC18.79■□□□□ 0.6
USP46P62068 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP46P62068 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
USP46P62068 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.79■□□□□ 0.6
USP46P62068 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
USP46P62068 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
USP46P62068 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.79■□□□□ 0.6
USP46P62068 SAPCD2P3-201ENST00000455031 850 ntBASIC18.79■□□□□ 0.6
USP46P62068 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.79■□□□□ 0.6
USP46P62068 AC009533.2-201ENST00000543664 586 ntBASIC18.79■□□□□ 0.6
USP46P62068 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.79■□□□□ 0.6
USP46P62068 AL160237.2-201ENST00000556165 472 ntBASIC18.79■□□□□ 0.6
USP46P62068 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP46P62068 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
USP46P62068 AL121912.1-201ENST00000603683 238 ntBASIC18.79■□□□□ 0.6
USP46P62068 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.79■□□□□ 0.6
USP46P62068 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.79■□□□□ 0.6
USP46P62068 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.79■□□□□ 0.6
USP46P62068 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP46P62068 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP46P62068 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP46P62068 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP46P62068 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP46P62068 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP46P62068 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.79■□□□□ 0.6
USP46P62068 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.79■□□□□ 0.6
USP46P62068 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.79■□□□□ 0.6
USP46P62068 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
USP46P62068 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.79■□□□□ 0.6
USP46P62068 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms