Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.64■□□□□ 0.41
CLDN2P57739 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN2P57739 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.64■□□□□ 0.41
CLDN2P57739 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLDN2P57739 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.64■□□□□ 0.41
CLDN2P57739 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLDN2P57739 AC097374.2-201ENST00000618617 1306 ntBASIC17.64■□□□□ 0.41
CLDN2P57739 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN2P57739 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN2P57739 AL356309.3-201ENST00000624132 1934 ntBASIC17.64■□□□□ 0.41
CLDN2P57739 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLDN2P57739 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN2P57739 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN2P57739 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN2P57739 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN2P57739 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN2P57739 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN2P57739 AC135776.1-201ENST00000319817 2481 ntBASIC17.63■□□□□ 0.41
CLDN2P57739 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN2P57739 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.63■□□□□ 0.41
CLDN2P57739 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
CLDN2P57739 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.63■□□□□ 0.41
CLDN2P57739 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN2P57739 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CLDN2P57739 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN2P57739 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN2P57739 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLDN2P57739 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN2P57739 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN2P57739 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN2P57739 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN2P57739 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN2P57739 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN2P57739 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN2P57739 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN2P57739 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.63■□□□□ 0.41
CLDN2P57739 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.63■□□□□ 0.41
CLDN2P57739 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.63■□□□□ 0.41
CLDN2P57739 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CLDN2P57739 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.63■□□□□ 0.41
CLDN2P57739 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.63■□□□□ 0.41
CLDN2P57739 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN2P57739 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLDN2P57739 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CLDN2P57739 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN2P57739 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN2P57739 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CLDN2P57739 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN2P57739 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN2P57739 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN2P57739 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
CLDN2P57739 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN2P57739 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN2P57739 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN2P57739 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CLDN2P57739 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN2P57739 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CLDN2P57739 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN2P57739 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN2P57739 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN2P57739 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN2P57739 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN2P57739 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN2P57739 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN2P57739 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN2P57739 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN2P57739 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN2P57739 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN2P57739 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN2P57739 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CLDN2P57739 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CLDN2P57739 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN2P57739 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.62■□□□□ 0.41
CLDN2P57739 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.62■□□□□ 0.41
CLDN2P57739 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN2P57739 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN2P57739 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN2P57739 AC139887.3-201ENST00000568585 713 ntBASIC17.62■□□□□ 0.41
CLDN2P57739 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN2P57739 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.62■□□□□ 0.41
CLDN2P57739 NKAPP1-205ENST00000585790 367 ntBASIC17.62■□□□□ 0.41
CLDN2P57739 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CLDN2P57739 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN2P57739 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN2P57739 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN2P57739 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN2P57739 AC093677.2-201ENST00000600169 1863 ntBASIC17.62■□□□□ 0.41
CLDN2P57739 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN2P57739 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN2P57739 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN2P57739 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CLDN2P57739 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.61■□□□□ 0.41
CLDN2P57739 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN2P57739 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CLDN2P57739 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN2P57739 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
CLDN2P57739 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN2P57739 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN2P57739 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN2P57739 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms