Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NUBP1P53384 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUBP1P53384 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NUBP1P53384 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NUBP1P53384 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUBP1P53384 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.79■□□□□ 0.44
NUBP1P53384 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.79■□□□□ 0.44
NUBP1P53384 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.79■□□□□ 0.44
NUBP1P53384 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUBP1P53384 AC004817.3-201ENST00000602957 2129 ntBASIC17.78■□□□□ 0.44
NUBP1P53384 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NUBP1P53384 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUBP1P53384 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.78■□□□□ 0.44
NUBP1P53384 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NUBP1P53384 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUBP1P53384 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.78■□□□□ 0.44
NUBP1P53384 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NUBP1P53384 TRMT13-201ENST00000370139 711 ntTSL 3 BASIC17.78■□□□□ 0.44
NUBP1P53384 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUBP1P53384 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC17.78■□□□□ 0.44
NUBP1P53384 SIGLEC30P-201ENST00000455569 941 ntBASIC17.78■□□□□ 0.44
NUBP1P53384 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUBP1P53384 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
NUBP1P53384 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.78■□□□□ 0.44
NUBP1P53384 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.78■□□□□ 0.44
NUBP1P53384 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.78■□□□□ 0.44
NUBP1P53384 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NUBP1P53384 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.78■□□□□ 0.44
NUBP1P53384 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.78■□□□□ 0.44
NUBP1P53384 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.78■□□□□ 0.44
NUBP1P53384 AP001198.2-201ENST00000593121 466 ntTSL 2 BASIC17.78■□□□□ 0.44
NUBP1P53384 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUBP1P53384 AC112187.3-201ENST00000607844 408 ntBASIC17.78■□□□□ 0.44
NUBP1P53384 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUBP1P53384 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUBP1P53384 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUBP1P53384 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUBP1P53384 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.78■□□□□ 0.44
NUBP1P53384 MAPK10-379ENST00000642013 1385 ntBASIC17.78■□□□□ 0.44
NUBP1P53384 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUBP1P53384 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
NUBP1P53384 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NUBP1P53384 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.77■□□□□ 0.44
NUBP1P53384 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NUBP1P53384 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.77■□□□□ 0.44
NUBP1P53384 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.77■□□□□ 0.44
NUBP1P53384 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC17.77■□□□□ 0.44
NUBP1P53384 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC17.77■□□□□ 0.44
NUBP1P53384 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.77■□□□□ 0.44
NUBP1P53384 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC17.77■□□□□ 0.44
NUBP1P53384 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.77■□□□□ 0.44
NUBP1P53384 AP001830.1-201ENST00000528717 692 ntTSL 2 BASIC17.77■□□□□ 0.44
NUBP1P53384 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.77■□□□□ 0.44
NUBP1P53384 AL356019.1-201ENST00000553419 748 ntTSL 2 BASIC17.77■□□□□ 0.44
NUBP1P53384 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NUBP1P53384 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.77■□□□□ 0.44
NUBP1P53384 AC051619.7-201ENST00000568314 623 ntBASIC17.77■□□□□ 0.44
NUBP1P53384 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.77■□□□□ 0.44
NUBP1P53384 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.77■□□□□ 0.44
NUBP1P53384 AC068137.2-201ENST00000605408 478 ntBASIC17.77■□□□□ 0.44
NUBP1P53384 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.77■□□□□ 0.44
NUBP1P53384 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
NUBP1P53384 AC008761.3-201ENST00000624803 892 ntBASIC17.77■□□□□ 0.44
NUBP1P53384 AC073592.5-201ENST00000624854 528 ntBASIC17.77■□□□□ 0.44
NUBP1P53384 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NUBP1P53384 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.77■□□□□ 0.44
NUBP1P53384 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NUBP1P53384 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NUBP1P53384 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.77■□□□□ 0.43
NUBP1P53384 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NUBP1P53384 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NUBP1P53384 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NUBP1P53384 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUBP1P53384 AL353593.2-201ENST00000602529 1483 ntBASIC17.76■□□□□ 0.43
NUBP1P53384 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.76■□□□□ 0.43
NUBP1P53384 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUBP1P53384 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NUBP1P53384 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NUBP1P53384 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.76■□□□□ 0.43
NUBP1P53384 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUBP1P53384 MEIS3P1-201ENST00000495167 958 ntBASIC17.76■□□□□ 0.43
NUBP1P53384 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NUBP1P53384 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.76■□□□□ 0.43
NUBP1P53384 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NUBP1P53384 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NUBP1P53384 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.76■□□□□ 0.43
NUBP1P53384 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.76■□□□□ 0.43
NUBP1P53384 AC015849.4-201ENST00000603678 421 ntTSL 5 BASIC17.76■□□□□ 0.43
NUBP1P53384 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUBP1P53384 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.76■□□□□ 0.43
NUBP1P53384 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.76■□□□□ 0.43
NUBP1P53384 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUBP1P53384 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NUBP1P53384 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
NUBP1P53384 SDHAP2-201ENST00000455183 2001 ntBASIC17.76■□□□□ 0.43
NUBP1P53384 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NUBP1P53384 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.75■□□□□ 0.43
NUBP1P53384 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUBP1P53384 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUBP1P53384 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms