Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A6P48664 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC1A6P48664 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC1A6P48664 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC1A6P48664 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SLC1A6P48664 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC1A6P48664 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SLC1A6P48664 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC1A6P48664 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.63■□□□□ 0.41
SLC1A6P48664 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.63■□□□□ 0.41
SLC1A6P48664 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC1A6P48664 AC112497.1-201ENST00000624824 639 ntBASIC17.63■□□□□ 0.41
SLC1A6P48664 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 AC022898.2-201ENST00000616822 1312 ntBASIC17.63■□□□□ 0.41
SLC1A6P48664 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC1A6P48664 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC1A6P48664 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SLC1A6P48664 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A6P48664 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A6P48664 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A6P48664 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC1A6P48664 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A6P48664 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC1A6P48664 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A6P48664 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A6P48664 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A6P48664 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A6P48664 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A6P48664 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A6P48664 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A6P48664 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC1A6P48664 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC1A6P48664 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC1A6P48664 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC1A6P48664 AL359736.2-201ENST00000621992 437 ntBASIC17.62■□□□□ 0.41
SLC1A6P48664 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A6P48664 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SLC1A6P48664 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SLC1A6P48664 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A6P48664 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A6P48664 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC1A6P48664 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A6P48664 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SLC1A6P48664 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A6P48664 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A6P48664 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A6P48664 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A6P48664 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC1A6P48664 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A6P48664 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A6P48664 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A6P48664 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
SLC1A6P48664 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC1A6P48664 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC1A6P48664 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SLC1A6P48664 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SLC1A6P48664 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A6P48664 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A6P48664 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.61■□□□□ 0.41
SLC1A6P48664 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A6P48664 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A6P48664 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.61■□□□□ 0.41
SLC1A6P48664 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.61■□□□□ 0.41
SLC1A6P48664 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.61■□□□□ 0.41
SLC1A6P48664 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.61■□□□□ 0.41
SLC1A6P48664 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.61■□□□□ 0.41
SLC1A6P48664 AL023803.3-201ENST00000615559 522 ntBASIC17.61■□□□□ 0.41
SLC1A6P48664 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
SLC1A6P48664 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A6P48664 AL118508.1-201ENST00000613502 2345 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms