Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PTPN3P26045 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PTPN3P26045 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.28■□□□□ 0.52
PTPN3P26045 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN3P26045 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN3P26045 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.27■□□□□ 0.52
PTPN3P26045 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN3P26045 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN3P26045 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN3P26045 Z83836.1-201ENST00000624605 1642 ntBASIC18.27■□□□□ 0.52
PTPN3P26045 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PTPN3P26045 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.27■□□□□ 0.52
PTPN3P26045 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN3P26045 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN3P26045 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.27■□□□□ 0.52
PTPN3P26045 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN3P26045 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN3P26045 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN3P26045 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.27■□□□□ 0.52
PTPN3P26045 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PTPN3P26045 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN3P26045 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.27■□□□□ 0.52
PTPN3P26045 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN3P26045 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.27■□□□□ 0.52
PTPN3P26045 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.27■□□□□ 0.52
PTPN3P26045 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN3P26045 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN3P26045 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN3P26045 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PTPN3P26045 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN3P26045 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTPN3P26045 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
PTPN3P26045 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTPN3P26045 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTPN3P26045 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
PTPN3P26045 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
PTPN3P26045 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN3P26045 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PTPN3P26045 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN3P26045 AC009949.1-201ENST00000623048 1830 ntBASIC18.26■□□□□ 0.51
PTPN3P26045 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN3P26045 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PTPN3P26045 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN3P26045 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.26■□□□□ 0.51
PTPN3P26045 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN3P26045 AL645929.1-201ENST00000420084 975 ntBASIC18.26■□□□□ 0.51
PTPN3P26045 FAM210CP-201ENST00000445714 574 ntBASIC18.26■□□□□ 0.51
PTPN3P26045 AC112698.1-201ENST00000510299 916 ntBASIC18.26■□□□□ 0.51
PTPN3P26045 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PTPN3P26045 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN3P26045 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.26■□□□□ 0.51
PTPN3P26045 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN3P26045 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PTPN3P26045 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN3P26045 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN3P26045 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PTPN3P26045 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN3P26045 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN3P26045 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN3P26045 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN3P26045 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN3P26045 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PTPN3P26045 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPN3P26045 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PTPN3P26045 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.25■□□□□ 0.51
PTPN3P26045 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPN3P26045 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN3P26045 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
PTPN3P26045 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN3P26045 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPN3P26045 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPN3P26045 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN3P26045 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN3P26045 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PTPN3P26045 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN3P26045 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN3P26045 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN3P26045 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN3P26045 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN3P26045 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PTPN3P26045 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPN3P26045 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.25■□□□□ 0.51
PTPN3P26045 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN3P26045 AC068472.1-201ENST00000474589 881 ntBASIC18.25■□□□□ 0.51
PTPN3P26045 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
PTPN3P26045 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.25■□□□□ 0.51
PTPN3P26045 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPN3P26045 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPN3P26045 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN3P26045 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN3P26045 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPN3P26045 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPN3P26045 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PTPN3P26045 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN3P26045 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN3P26045 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN3P26045 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PTPN3P26045 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PTPN3P26045 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN3P26045 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms