Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TPM3P06753 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.12■□□□□ 0.81
TPM3P06753 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.12■□□□□ 0.81
TPM3P06753 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.12■□□□□ 0.81
TPM3P06753 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TPM3P06753 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM3P06753 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM3P06753 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TPM3P06753 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM3P06753 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM3P06753 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM3P06753 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM3P06753 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM3P06753 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.12■□□□□ 0.81
TPM3P06753 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM3P06753 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM3P06753 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TPM3P06753 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TPM3P06753 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM3P06753 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TPM3P06753 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM3P06753 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM3P06753 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TPM3P06753 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TPM3P06753 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM3P06753 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.11■□□□□ 0.81
TPM3P06753 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TPM3P06753 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM3P06753 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM3P06753 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.11■□□□□ 0.81
TPM3P06753 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM3P06753 AC133963.1-201ENST00000504166 1679 ntBASIC20.11■□□□□ 0.81
TPM3P06753 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
TPM3P06753 MIR149-201ENST00000384879 89 ntBASIC20.11■□□□□ 0.81
TPM3P06753 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.11■□□□□ 0.81
TPM3P06753 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
TPM3P06753 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.11■□□□□ 0.81
TPM3P06753 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.11■□□□□ 0.81
TPM3P06753 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TPM3P06753 AC008622.2-201ENST00000617006 1229 ntBASIC20.11■□□□□ 0.81
TPM3P06753 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
TPM3P06753 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.11■□□□□ 0.81
TPM3P06753 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM3P06753 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.11■□□□□ 0.81
TPM3P06753 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM3P06753 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TPM3P06753 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM3P06753 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM3P06753 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TPM3P06753 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.1■□□□□ 0.81
TPM3P06753 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TPM3P06753 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM3P06753 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.1■□□□□ 0.81
TPM3P06753 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM3P06753 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM3P06753 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TPM3P06753 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
TPM3P06753 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM3P06753 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.1■□□□□ 0.81
TPM3P06753 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TPM3P06753 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
TPM3P06753 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM3P06753 AL355312.1-201ENST00000407115 2176 ntBASIC20.1■□□□□ 0.81
TPM3P06753 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM3P06753 AL355802.2-201ENST00000402069 882 ntBASIC20.1■□□□□ 0.81
TPM3P06753 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM3P06753 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.1■□□□□ 0.81
TPM3P06753 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
TPM3P06753 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.1■□□□□ 0.81
TPM3P06753 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TPM3P06753 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM3P06753 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM3P06753 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM3P06753 PKD1P5-201ENST00000532415 10291 ntBASIC20.1■□□□□ 0.81
TPM3P06753 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM3P06753 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM3P06753 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TPM3P06753 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TPM3P06753 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPM3P06753 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM3P06753 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TPM3P06753 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TPM3P06753 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPM3P06753 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM3P06753 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPM3P06753 CROCCP2-202ENST00000412962 2773 ntBASIC20.09■□□□□ 0.81
TPM3P06753 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TPM3P06753 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM3P06753 AL163051.1-201ENST00000569214 1512 ntBASIC20.09■□□□□ 0.81
TPM3P06753 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM3P06753 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPM3P06753 AC008040.2-201ENST00000461049 708 ntBASIC20.09■□□□□ 0.81
TPM3P06753 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.09■□□□□ 0.81
TPM3P06753 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.09■□□□□ 0.81
TPM3P06753 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TPM3P06753 RN7SL471P-201ENST00000580476 299 ntBASIC20.09■□□□□ 0.81
TPM3P06753 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.09■□□□□ 0.81
TPM3P06753 MIR6786-201ENST00000616843 113 ntBASIC20.09■□□□□ 0.81
TPM3P06753 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TPM3P06753 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms