Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GFRA3O60609 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
GFRA3O60609 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GFRA3O60609 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
GFRA3O60609 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
GFRA3O60609 MIR658-201ENST00000385210 100 ntBASIC17.27■□□□□ 0.36
GFRA3O60609 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
GFRA3O60609 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.27■□□□□ 0.36
GFRA3O60609 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.27■□□□□ 0.36
GFRA3O60609 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.27■□□□□ 0.36
GFRA3O60609 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GFRA3O60609 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.27■□□□□ 0.36
GFRA3O60609 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.27■□□□□ 0.36
GFRA3O60609 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
GFRA3O60609 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GFRA3O60609 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.27■□□□□ 0.36
GFRA3O60609 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
GFRA3O60609 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.27■□□□□ 0.36
GFRA3O60609 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.27■□□□□ 0.36
GFRA3O60609 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GFRA3O60609 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.27■□□□□ 0.36
GFRA3O60609 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
GFRA3O60609 AC099343.3-201ENST00000605834 2503 ntBASIC17.27■□□□□ 0.36
GFRA3O60609 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.27■□□□□ 0.36
GFRA3O60609 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.27■□□□□ 0.36
GFRA3O60609 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
GFRA3O60609 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GFRA3O60609 AC008677.1-201ENST00000519230 1561 ntBASIC17.27■□□□□ 0.35
GFRA3O60609 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
GFRA3O60609 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
GFRA3O60609 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
GFRA3O60609 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
GFRA3O60609 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GFRA3O60609 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GFRA3O60609 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GFRA3O60609 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GFRA3O60609 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
GFRA3O60609 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GFRA3O60609 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GFRA3O60609 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
GFRA3O60609 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
GFRA3O60609 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.26■□□□□ 0.35
GFRA3O60609 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GFRA3O60609 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.26■□□□□ 0.35
GFRA3O60609 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
GFRA3O60609 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GFRA3O60609 PTCHD3P3-201ENST00000403073 906 ntBASIC17.26■□□□□ 0.35
GFRA3O60609 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.26■□□□□ 0.35
GFRA3O60609 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.26■□□□□ 0.35
GFRA3O60609 SPDYE7P-202ENST00000420373 878 ntBASIC17.26■□□□□ 0.35
GFRA3O60609 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.26■□□□□ 0.35
GFRA3O60609 GPS2P2-201ENST00000430745 888 ntBASIC17.26■□□□□ 0.35
GFRA3O60609 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GFRA3O60609 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GFRA3O60609 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GFRA3O60609 ACA64.2-201ENST00000459014 129 ntBASIC17.26■□□□□ 0.35
GFRA3O60609 AC079140.1-201ENST00000508039 487 ntBASIC17.26■□□□□ 0.35
GFRA3O60609 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
GFRA3O60609 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.26■□□□□ 0.35
GFRA3O60609 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
GFRA3O60609 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GFRA3O60609 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GFRA3O60609 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GFRA3O60609 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.26■□□□□ 0.35
GFRA3O60609 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GFRA3O60609 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
GFRA3O60609 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GFRA3O60609 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.26■□□□□ 0.35
GFRA3O60609 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.26■□□□□ 0.35
GFRA3O60609 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GFRA3O60609 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GFRA3O60609 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
GFRA3O60609 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.25■□□□□ 0.35
GFRA3O60609 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.25■□□□□ 0.35
GFRA3O60609 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GFRA3O60609 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.25■□□□□ 0.35
GFRA3O60609 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GFRA3O60609 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.25■□□□□ 0.35
GFRA3O60609 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.25■□□□□ 0.35
GFRA3O60609 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.25■□□□□ 0.35
GFRA3O60609 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GFRA3O60609 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
GFRA3O60609 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.25■□□□□ 0.35
GFRA3O60609 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.25■□□□□ 0.35
GFRA3O60609 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.25■□□□□ 0.35
GFRA3O60609 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.25■□□□□ 0.35
GFRA3O60609 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
GFRA3O60609 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.25■□□□□ 0.35
GFRA3O60609 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.25■□□□□ 0.35
GFRA3O60609 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.25■□□□□ 0.35
GFRA3O60609 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GFRA3O60609 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.25■□□□□ 0.35
GFRA3O60609 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
GFRA3O60609 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.25■□□□□ 0.35
GFRA3O60609 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA3O60609 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA3O60609 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA3O60609 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
GFRA3O60609 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA3O60609 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms