Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.43■□□□□ 0.7
EXTL3O43909 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EXTL3O43909 AC097374.2-201ENST00000618617 1306 ntBASIC19.43■□□□□ 0.7
EXTL3O43909 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.43■□□□□ 0.7
EXTL3O43909 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EXTL3O43909 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EXTL3O43909 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EXTL3O43909 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
EXTL3O43909 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EXTL3O43909 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.43■□□□□ 0.7
EXTL3O43909 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EXTL3O43909 AC125634.1-201ENST00000438758 1403 ntBASIC19.42■□□□□ 0.7
EXTL3O43909 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
EXTL3O43909 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EXTL3O43909 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EXTL3O43909 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
EXTL3O43909 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
EXTL3O43909 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EXTL3O43909 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EXTL3O43909 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EXTL3O43909 AC096633.1-201ENST00000422446 749 ntBASIC19.42■□□□□ 0.7
EXTL3O43909 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.42■□□□□ 0.7
EXTL3O43909 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.42■□□□□ 0.7
EXTL3O43909 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
EXTL3O43909 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.42■□□□□ 0.7
EXTL3O43909 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
EXTL3O43909 AL138831.2-201ENST00000606564 490 ntBASIC19.42■□□□□ 0.7
EXTL3O43909 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EXTL3O43909 AC012313.10-201ENST00000623509 926 ntBASIC19.42■□□□□ 0.7
EXTL3O43909 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
EXTL3O43909 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
EXTL3O43909 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EXTL3O43909 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
EXTL3O43909 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EXTL3O43909 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.42■□□□□ 0.7
EXTL3O43909 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.41■□□□□ 0.7
EXTL3O43909 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.41■□□□□ 0.7
EXTL3O43909 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EXTL3O43909 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EXTL3O43909 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EXTL3O43909 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
EXTL3O43909 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EXTL3O43909 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EXTL3O43909 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EXTL3O43909 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
EXTL3O43909 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.41■□□□□ 0.7
EXTL3O43909 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.41■□□□□ 0.7
EXTL3O43909 IGHV3-47-201ENST00000425060 335 ntBASIC19.41■□□□□ 0.7
EXTL3O43909 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EXTL3O43909 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EXTL3O43909 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.41■□□□□ 0.7
EXTL3O43909 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EXTL3O43909 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.41■□□□□ 0.7
EXTL3O43909 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.41■□□□□ 0.7
EXTL3O43909 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
EXTL3O43909 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
EXTL3O43909 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
EXTL3O43909 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EXTL3O43909 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EXTL3O43909 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EXTL3O43909 AC009949.1-201ENST00000623048 1830 ntBASIC19.41■□□□□ 0.7
EXTL3O43909 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EXTL3O43909 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EXTL3O43909 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
EXTL3O43909 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.41■□□□□ 0.7
EXTL3O43909 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.4■□□□□ 0.7
EXTL3O43909 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
EXTL3O43909 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
EXTL3O43909 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.4■□□□□ 0.7
EXTL3O43909 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
EXTL3O43909 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.4■□□□□ 0.7
EXTL3O43909 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EXTL3O43909 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.4■□□□□ 0.7
EXTL3O43909 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
EXTL3O43909 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.4■□□□□ 0.7
EXTL3O43909 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.4■□□□□ 0.7
EXTL3O43909 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EXTL3O43909 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
EXTL3O43909 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EXTL3O43909 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EXTL3O43909 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.4■□□□□ 0.7
EXTL3O43909 AC074051.2-201ENST00000565115 352 ntBASIC19.4■□□□□ 0.7
EXTL3O43909 AC012615.1-201ENST00000565797 1299 ntBASIC19.4■□□□□ 0.7
EXTL3O43909 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EXTL3O43909 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.4■□□□□ 0.7
EXTL3O43909 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EXTL3O43909 NOC2LP2-201ENST00000407594 1944 ntBASIC19.4■□□□□ 0.7
EXTL3O43909 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EXTL3O43909 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.4■□□□□ 0.7
EXTL3O43909 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EXTL3O43909 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
EXTL3O43909 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
EXTL3O43909 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
EXTL3O43909 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EXTL3O43909 NSUN5P1-202ENST00000421140 1535 ntBASIC19.4■□□□□ 0.7
EXTL3O43909 NSUN5P2-203ENST00000457352 1529 ntBASIC19.4■□□□□ 0.7
EXTL3O43909 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
EXTL3O43909 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EXTL3O43909 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.4■□□□□ 0.7
EXTL3O43909 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms