Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRANK1O15050 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRANK1O15050 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.69■□□□□ 0.58
TRANK1O15050 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRANK1O15050 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.68■□□□□ 0.58
TRANK1O15050 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.68■□□□□ 0.58
TRANK1O15050 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRANK1O15050 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRANK1O15050 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.68■□□□□ 0.58
TRANK1O15050 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.68■□□□□ 0.58
TRANK1O15050 DUX4L17-201ENST00000557360 1267 ntBASIC18.68■□□□□ 0.58
TRANK1O15050 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.68■□□□□ 0.58
TRANK1O15050 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.68■□□□□ 0.58
TRANK1O15050 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
TRANK1O15050 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.68■□□□□ 0.58
TRANK1O15050 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRANK1O15050 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
TRANK1O15050 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.68■□□□□ 0.58
TRANK1O15050 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.68■□□□□ 0.58
TRANK1O15050 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRANK1O15050 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRANK1O15050 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.68■□□□□ 0.58
TRANK1O15050 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.68■□□□□ 0.58
TRANK1O15050 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.68■□□□□ 0.58
TRANK1O15050 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.68■□□□□ 0.58
TRANK1O15050 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRANK1O15050 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRANK1O15050 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRANK1O15050 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.68■□□□□ 0.58
TRANK1O15050 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.68■□□□□ 0.58
TRANK1O15050 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRANK1O15050 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRANK1O15050 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.68■□□□□ 0.58
TRANK1O15050 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.68■□□□□ 0.58
TRANK1O15050 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRANK1O15050 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRANK1O15050 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRANK1O15050 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRANK1O15050 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRANK1O15050 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
TRANK1O15050 FAM58DP-201ENST00000428076 619 ntBASIC18.67■□□□□ 0.58
TRANK1O15050 AC055876.3-201ENST00000431496 288 ntBASIC18.67■□□□□ 0.58
TRANK1O15050 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.67■□□□□ 0.58
TRANK1O15050 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRANK1O15050 AC138649.4-201ENST00000612222 287 ntBASIC18.67■□□□□ 0.58
TRANK1O15050 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.67■□□□□ 0.58
TRANK1O15050 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.67■□□□□ 0.58
TRANK1O15050 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRANK1O15050 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRANK1O15050 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRANK1O15050 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.67■□□□□ 0.58
TRANK1O15050 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRANK1O15050 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.67■□□□□ 0.58
TRANK1O15050 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.67■□□□□ 0.58
TRANK1O15050 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.67■□□□□ 0.58
TRANK1O15050 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
TRANK1O15050 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRANK1O15050 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRANK1O15050 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRANK1O15050 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRANK1O15050 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRANK1O15050 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRANK1O15050 GK-202ENST00000378941 458 ntTSL 3 BASIC18.67■□□□□ 0.58
TRANK1O15050 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRANK1O15050 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRANK1O15050 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.67■□□□□ 0.58
TRANK1O15050 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRANK1O15050 AC004449.1-201ENST00000564240 433 ntBASIC18.67■□□□□ 0.58
TRANK1O15050 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.67■□□□□ 0.58
TRANK1O15050 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRANK1O15050 AC100803.2-201ENST00000562459 1963 ntBASIC18.66■□□□□ 0.58
TRANK1O15050 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.66■□□□□ 0.58
TRANK1O15050 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRANK1O15050 AL020989.1-201ENST00000422979 469 ntBASIC18.66■□□□□ 0.58
TRANK1O15050 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.66■□□□□ 0.58
TRANK1O15050 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TRANK1O15050 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRANK1O15050 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.66■□□□□ 0.58
TRANK1O15050 DUX4L27-201ENST00000554796 1261 ntBASIC18.66■□□□□ 0.58
TRANK1O15050 AC096734.2-201ENST00000562054 433 ntBASIC18.66■□□□□ 0.58
TRANK1O15050 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRANK1O15050 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRANK1O15050 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRANK1O15050 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRANK1O15050 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRANK1O15050 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRANK1O15050 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.66■□□□□ 0.58
TRANK1O15050 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.66■□□□□ 0.58
TRANK1O15050 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.66■□□□□ 0.58
TRANK1O15050 RPS15P9-201ENST00000494093 319 ntBASIC18.66■□□□□ 0.58
TRANK1O15050 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.66■□□□□ 0.58
TRANK1O15050 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.66■□□□□ 0.58
TRANK1O15050 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.66■□□□□ 0.58
TRANK1O15050 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.66■□□□□ 0.58
TRANK1O15050 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.66■□□□□ 0.58
TRANK1O15050 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRANK1O15050 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.66■□□□□ 0.58
TRANK1O15050 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRANK1O15050 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.65■□□□□ 0.58
TRANK1O15050 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms