Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 AL024508.2-201ENST00000607749 1894 ntBASIC15.32■□□□□ 0.04
TMEM235A6NFC5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.32■□□□□ 0.04
TMEM235A6NFC5 KRT18P23-201ENST00000435622 1283 ntBASIC15.32■□□□□ 0.04
TMEM235A6NFC5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 MIR4674-201ENST00000582457 87 ntBASIC15.32■□□□□ 0.04
TMEM235A6NFC5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 AC073648.6-201ENST00000641589 218 ntBASIC15.32■□□□□ 0.04
TMEM235A6NFC5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 HOXB1-202ENST00000577092 1414 ntBASIC15.32■□□□□ 0.04
TMEM235A6NFC5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM235A6NFC5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 SLC25A1P4-201ENST00000567977 778 ntBASIC15.31■□□□□ 0.04
TMEM235A6NFC5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 AL118508.1-201ENST00000613502 2345 ntBASIC15.31■□□□□ 0.04
TMEM235A6NFC5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TMEM235A6NFC5 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 AC011270.2-201ENST00000624293 2550 ntBASIC15.3■□□□□ 0.04
TMEM235A6NFC5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM235A6NFC5 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms