Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NOTCH3Q9UM47 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 Z98044.1-201ENST00000632503 1764 ntBASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 MIR940-201ENST00000401276 94 ntBASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 IGHV3-22-201ENST00000520721 359 ntBASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 SART3-203ENST00000546611 1184 ntBASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 AL355877.3-201ENST00000622820 899 ntBASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 MTMR9LP-203ENST00000426597 1545 ntBASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NOTCH3Q9UM47 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 AP005117.1-201ENST00000584346 1413 ntBASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 AC132008.2-207ENST00000454517 770 ntBASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 AC073648.2-201ENST00000510116 352 ntBASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 FEM1AP3-201ENST00000403722 1741 ntBASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NOTCH3Q9UM47 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms