Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 LHX6-205ENST00000464484 666 ntTSL 2 BASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 AC068137.2-201ENST00000605408 478 ntBASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 AL049757.1-201ENST00000616842 1596 ntBASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 FAM58CP-201ENST00000435741 640 ntBASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 RHOQP3-201ENST00000437982 621 ntBASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 MIR770-201ENST00000390219 98 ntBASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 DUTP2-201ENST00000519164 463 ntBASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC23.77■■□□□ 1.4
PHRF1Q9P1Y6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
PHRF1Q9P1Y6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC23.77■■□□□ 1.39
PHRF1Q9P1Y6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PHRF1Q9P1Y6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PHRF1Q9P1Y6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PHRF1Q9P1Y6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PHRF1Q9P1Y6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC23.76■■□□□ 1.39
PHRF1Q9P1Y6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PHRF1Q9P1Y6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC23.76■■□□□ 1.39
PHRF1Q9P1Y6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
PHRF1Q9P1Y6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC23.76■■□□□ 1.39
PHRF1Q9P1Y6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PHRF1Q9P1Y6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PHRF1Q9P1Y6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC23.76■■□□□ 1.39
PHRF1Q9P1Y6 OR7E47P-204ENST00000575924 449 ntBASIC23.76■■□□□ 1.39
PHRF1Q9P1Y6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC23.76■■□□□ 1.39
PHRF1Q9P1Y6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
PHRF1Q9P1Y6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PHRF1Q9P1Y6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
PHRF1Q9P1Y6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.76■■□□□ 1.39
PHRF1Q9P1Y6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PHRF1Q9P1Y6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 AC093512.1-201ENST00000617969 520 ntBASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 AC004877.2-201ENST00000623941 599 ntBASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.75■■□□□ 1.39
PHRF1Q9P1Y6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PHRF1Q9P1Y6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC23.74■■□□□ 1.39
PHRF1Q9P1Y6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PHRF1Q9P1Y6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC23.74■■□□□ 1.39
PHRF1Q9P1Y6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC23.74■■□□□ 1.39
PHRF1Q9P1Y6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC23.74■■□□□ 1.39
PHRF1Q9P1Y6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC23.74■■□□□ 1.39
PHRF1Q9P1Y6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC23.74■■□□□ 1.39
PHRF1Q9P1Y6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms