Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
NDE1Q9NXR1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.39■□□□□ 0.38
NDE1Q9NXR1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NDE1Q9NXR1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NDE1Q9NXR1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
NDE1Q9NXR1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NDE1Q9NXR1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
NDE1Q9NXR1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NDE1Q9NXR1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
NDE1Q9NXR1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 CDCA4P2-201ENST00000441182 718 ntBASIC17.39■□□□□ 0.37
NDE1Q9NXR1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 CKBP1-201ENST00000565489 1086 ntBASIC17.39■□□□□ 0.37
NDE1Q9NXR1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NDE1Q9NXR1 AC105020.1-201ENST00000435356 2205 ntBASIC17.39■□□□□ 0.37
NDE1Q9NXR1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.38■□□□□ 0.37
NDE1Q9NXR1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 SDHAP2-201ENST00000455183 2001 ntBASIC17.38■□□□□ 0.37
NDE1Q9NXR1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NDE1Q9NXR1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NDE1Q9NXR1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms