Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.53■□□□□ 0.72
HIPK3Q9H422 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HIPK3Q9H422 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HIPK3Q9H422 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.53■□□□□ 0.72
HIPK3Q9H422 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.53■□□□□ 0.72
HIPK3Q9H422 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.53■□□□□ 0.72
HIPK3Q9H422 AC092865.6-201ENST00000642101 219 ntBASIC19.53■□□□□ 0.72
HIPK3Q9H422 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIPK3Q9H422 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
HIPK3Q9H422 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIPK3Q9H422 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.53■□□□□ 0.72
HIPK3Q9H422 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIPK3Q9H422 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HIPK3Q9H422 AFG3L1P-217ENST00000557444 2447 ntBASIC19.53■□□□□ 0.72
HIPK3Q9H422 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.53■□□□□ 0.72
HIPK3Q9H422 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIPK3Q9H422 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.52■□□□□ 0.72
HIPK3Q9H422 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.52■□□□□ 0.72
HIPK3Q9H422 AC132938.6-201ENST00000623828 1655 ntBASIC19.52■□□□□ 0.72
HIPK3Q9H422 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIPK3Q9H422 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIPK3Q9H422 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIPK3Q9H422 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
HIPK3Q9H422 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
HIPK3Q9H422 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HIPK3Q9H422 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.52■□□□□ 0.72
HIPK3Q9H422 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIPK3Q9H422 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.52■□□□□ 0.72
HIPK3Q9H422 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
HIPK3Q9H422 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
HIPK3Q9H422 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.52■□□□□ 0.72
HIPK3Q9H422 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HIPK3Q9H422 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIPK3Q9H422 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIPK3Q9H422 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIPK3Q9H422 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
HIPK3Q9H422 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.52■□□□□ 0.72
HIPK3Q9H422 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.52■□□□□ 0.72
HIPK3Q9H422 MIR4751-201ENST00000578027 74 ntBASIC19.52■□□□□ 0.72
HIPK3Q9H422 C20orf181-201ENST00000623918 480 ntBASIC19.52■□□□□ 0.72
HIPK3Q9H422 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIPK3Q9H422 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIPK3Q9H422 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIPK3Q9H422 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.52■□□□□ 0.71
HIPK3Q9H422 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
HIPK3Q9H422 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
HIPK3Q9H422 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
HIPK3Q9H422 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
HIPK3Q9H422 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIPK3Q9H422 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HIPK3Q9H422 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
HIPK3Q9H422 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HIPK3Q9H422 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.51■□□□□ 0.71
HIPK3Q9H422 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIPK3Q9H422 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.51■□□□□ 0.71
HIPK3Q9H422 ELK2BP-201ENST00000415014 1224 ntBASIC19.51■□□□□ 0.71
HIPK3Q9H422 HTR5BP-201ENST00000430851 1154 ntBASIC19.51■□□□□ 0.71
HIPK3Q9H422 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.51■□□□□ 0.71
HIPK3Q9H422 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
HIPK3Q9H422 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
HIPK3Q9H422 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
HIPK3Q9H422 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.51■□□□□ 0.71
HIPK3Q9H422 AC073592.5-201ENST00000624854 528 ntBASIC19.51■□□□□ 0.71
HIPK3Q9H422 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.51■□□□□ 0.71
HIPK3Q9H422 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.51■□□□□ 0.71
HIPK3Q9H422 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HIPK3Q9H422 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HIPK3Q9H422 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
HIPK3Q9H422 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HIPK3Q9H422 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HIPK3Q9H422 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIPK3Q9H422 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIPK3Q9H422 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HIPK3Q9H422 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIPK3Q9H422 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIPK3Q9H422 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIPK3Q9H422 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIPK3Q9H422 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIPK3Q9H422 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIPK3Q9H422 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIPK3Q9H422 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.5■□□□□ 0.71
HIPK3Q9H422 CNN2P11-201ENST00000429351 262 ntBASIC19.5■□□□□ 0.71
HIPK3Q9H422 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
HIPK3Q9H422 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.5■□□□□ 0.71
HIPK3Q9H422 AC018845.2-201ENST00000568326 409 ntBASIC19.5■□□□□ 0.71
HIPK3Q9H422 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.5■□□□□ 0.71
HIPK3Q9H422 AC004706.3-202ENST00000621574 984 ntBASIC19.5■□□□□ 0.71
HIPK3Q9H422 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIPK3Q9H422 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
HIPK3Q9H422 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIPK3Q9H422 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
HIPK3Q9H422 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIPK3Q9H422 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIPK3Q9H422 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.5■□□□□ 0.71
HIPK3Q9H422 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIPK3Q9H422 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HIPK3Q9H422 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.5■□□□□ 0.71
HIPK3Q9H422 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIPK3Q9H422 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.49■□□□□ 0.71
HIPK3Q9H422 GMCL1P1-201ENST00000463439 1581 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms