Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 PTCD2P2-201ENST00000415579 1095 ntBASIC20.01■□□□□ 0.79
RNF39Q9H2S5 CHCHD2P8-201ENST00000429873 447 ntBASIC20.01■□□□□ 0.79
RNF39Q9H2S5 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 AC015910.1-202ENST00000580264 633 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF39Q9H2S5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF39Q9H2S5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RNF39Q9H2S5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF39Q9H2S5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20■□□□□ 0.79
RNF39Q9H2S5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20■□□□□ 0.79
RNF39Q9H2S5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20■□□□□ 0.79
RNF39Q9H2S5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF39Q9H2S5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF39Q9H2S5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF39Q9H2S5 AL606490.5-201ENST00000413071 760 ntBASIC20■□□□□ 0.79
RNF39Q9H2S5 LINC02262-201ENST00000416680 735 ntTSL 3 BASIC20■□□□□ 0.79
RNF39Q9H2S5 AL157385.1-201ENST00000446973 268 ntBASIC20■□□□□ 0.79
RNF39Q9H2S5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF39Q9H2S5 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF39Q9H2S5 AP003733.1-201ENST00000491725 852 ntBASIC20■□□□□ 0.79
RNF39Q9H2S5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20■□□□□ 0.79
RNF39Q9H2S5 AL133330.1-201ENST00000510619 704 ntTSL 5 BASIC20■□□□□ 0.79
RNF39Q9H2S5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20■□□□□ 0.79
RNF39Q9H2S5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20■□□□□ 0.79
RNF39Q9H2S5 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC20■□□□□ 0.79
RNF39Q9H2S5 AC002044.3-201ENST00000623314 541 ntBASIC20■□□□□ 0.79
RNF39Q9H2S5 AL109659.3-201ENST00000624985 950 ntBASIC20■□□□□ 0.79
RNF39Q9H2S5 CASC19-222ENST00000641321 1173 ntBASIC20■□□□□ 0.79
RNF39Q9H2S5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF39Q9H2S5 AL163051.1-201ENST00000569214 1512 ntBASIC20■□□□□ 0.79
RNF39Q9H2S5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF39Q9H2S5 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF39Q9H2S5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF39Q9H2S5 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RNF39Q9H2S5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20■□□□□ 0.79
RNF39Q9H2S5 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20■□□□□ 0.79
RNF39Q9H2S5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20■□□□□ 0.79
RNF39Q9H2S5 AL499627.1-201ENST00000569373 2188 ntBASIC20■□□□□ 0.79
RNF39Q9H2S5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 AL450487.1-201ENST00000426799 995 ntBASIC19.99■□□□□ 0.79
RNF39Q9H2S5 AC092810.1-201ENST00000429208 1224 ntBASIC19.99■□□□□ 0.79
RNF39Q9H2S5 AL356273.1-201ENST00000441261 1152 ntBASIC19.99■□□□□ 0.79
RNF39Q9H2S5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 HYI-AS1-201ENST00000444386 545 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 LINC01377-201ENST00000505396 649 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 KRT18P1-202ENST00000452408 1331 ntBASIC19.99■□□□□ 0.79
RNF39Q9H2S5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF39Q9H2S5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 SMIM30-201ENST00000397764 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 LNX1-AS2-202ENST00000509974 628 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms