Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 PCBP2-223ENST00000552819 1418 ntAPPRIS ALT1 TSL 2 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 ZNF519P3-201ENST00000557158 1032 ntBASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 MPDU1-223ENST00000582151 728 ntBASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 AL158152.1-201ENST00000602652 1435 ntBASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 AC092106.3-201ENST00000611308 722 ntBASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 FRG1KP-201ENST00000623592 341 ntBASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 AC092701.1-201ENST00000623627 1551 ntBASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC11.22□□□□□ -0.61
KRTAP3-3Q9BYR6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 H19-210ENST00000439725 1929 ntTSL 2 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 HSPA14-202ENST00000437161 1689 ntTSL 2 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 AC009831.1-201ENST00000580420 1582 ntBASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 DUT-208ENST00000559540 1441 ntTSL 2 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 AL132639.2-201ENST00000605298 1359 ntBASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 PAX8-AS1-213ENST00000609210 1328 ntTSL 5 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 GGCT-204ENST00000409390 767 ntTSL 2 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 USP9YP24-201ENST00000434374 697 ntBASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 USP9YP17-201ENST00000444617 696 ntBASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 AC004022.1-201ENST00000447766 1066 ntBASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 HGF-208ENST00000453411 1111 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 AC023906.1-201ENST00000486386 453 ntBASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 BTF3L4-205ENST00000489308 794 ntTSL 2 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 SLC35A5-207ENST00000494706 840 ntTSL 5 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 MTCO2P9-201ENST00000503214 694 ntBASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 RNU6-264P-201ENST00000517134 104 ntBASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 LDHA-220ENST00000542179 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 B2M-208ENST00000559916 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 AC020910.2-201ENST00000603635 610 ntBASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 AC092120.3-201ENST00000605168 568 ntBASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 AL008582.1-201ENST00000609612 442 ntBASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 TSHZ2-205ENST00000626626 670 ntBASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC11.21□□□□□ -0.61
KRTAP3-3Q9BYR6 LINC00565-201ENST00000562710 2331 ntBASIC11.21□□□□□ -0.62
KRTAP3-3Q9BYR6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
KRTAP3-3Q9BYR6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
KRTAP3-3Q9BYR6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
KRTAP3-3Q9BYR6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
KRTAP3-3Q9BYR6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
KRTAP3-3Q9BYR6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.62
KRTAP3-3Q9BYR6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
KRTAP3-3Q9BYR6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
KRTAP3-3Q9BYR6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
KRTAP3-3Q9BYR6 HSPD1P9-201ENST00000420325 1636 ntBASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 AC090181.3-201ENST00000624777 1514 ntBASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 RPL13AP3-202ENST00000494676 1473 ntBASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 LINC01992-201ENST00000567574 1340 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms