Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
ABCA3Q99758 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ABCA3Q99758 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.68■■□□□ 1.38
ABCA3Q99758 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC23.68■■□□□ 1.38
ABCA3Q99758 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ABCA3Q99758 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ABCA3Q99758 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
ABCA3Q99758 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
ABCA3Q99758 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
ABCA3Q99758 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ABCA3Q99758 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC23.67■■□□□ 1.38
ABCA3Q99758 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
ABCA3Q99758 AC023141.13-201ENST00000604991 943 ntBASIC23.67■■□□□ 1.38
ABCA3Q99758 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC23.67■■□□□ 1.38
ABCA3Q99758 LINC00628-201ENST00000628516 1289 ntBASIC23.67■■□□□ 1.38
ABCA3Q99758 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ABCA3Q99758 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
ABCA3Q99758 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ABCA3Q99758 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ABCA3Q99758 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC23.67■■□□□ 1.38
ABCA3Q99758 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
ABCA3Q99758 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ABCA3Q99758 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC23.67■■□□□ 1.38
ABCA3Q99758 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ABCA3Q99758 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
ABCA3Q99758 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC23.67■■□□□ 1.38
ABCA3Q99758 AC244107.1-201ENST00000442033 332 ntBASIC23.67■■□□□ 1.38
ABCA3Q99758 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC23.67■■□□□ 1.38
ABCA3Q99758 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC23.67■■□□□ 1.38
ABCA3Q99758 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
ABCA3Q99758 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC23.67■■□□□ 1.38
ABCA3Q99758 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
ABCA3Q99758 GGTLC5P-201ENST00000617623 998 ntBASIC23.67■■□□□ 1.38
ABCA3Q99758 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC23.67■■□□□ 1.38
ABCA3Q99758 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ABCA3Q99758 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC23.67■■□□□ 1.38
ABCA3Q99758 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.66■■□□□ 1.38
ABCA3Q99758 AC009336.1-201ENST00000608941 1553 ntBASIC23.66■■□□□ 1.38
ABCA3Q99758 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.66■■□□□ 1.38
ABCA3Q99758 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ABCA3Q99758 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
ABCA3Q99758 AC007952.6-201ENST00000573168 2673 ntBASIC23.66■■□□□ 1.38
ABCA3Q99758 AC003957.1-201ENST00000625108 2673 ntBASIC23.66■■□□□ 1.38
ABCA3Q99758 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
ABCA3Q99758 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
ABCA3Q99758 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC23.66■■□□□ 1.38
ABCA3Q99758 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC23.66■■□□□ 1.38
ABCA3Q99758 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ABCA3Q99758 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ABCA3Q99758 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC23.66■■□□□ 1.38
ABCA3Q99758 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC23.66■■□□□ 1.38
ABCA3Q99758 TK1-204ENST00000590430 683 ntTSL 3 BASIC23.66■■□□□ 1.38
ABCA3Q99758 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC23.66■■□□□ 1.38
ABCA3Q99758 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
ABCA3Q99758 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
ABCA3Q99758 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ABCA3Q99758 AC018445.3-201ENST00000624177 1945 ntBASIC23.66■■□□□ 1.38
ABCA3Q99758 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC23.66■■□□□ 1.38
ABCA3Q99758 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ABCA3Q99758 DDT-204ENST00000404092 805 ntTSL 3 BASIC23.65■■□□□ 1.38
ABCA3Q99758 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
ABCA3Q99758 AC004449.1-201ENST00000564240 433 ntBASIC23.65■■□□□ 1.38
ABCA3Q99758 MIR4745-201ENST00000577608 62 ntBASIC23.65■■□□□ 1.38
ABCA3Q99758 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ABCA3Q99758 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ABCA3Q99758 HFE2-206ENST00000634927 506 ntTSL 4 BASIC23.65■■□□□ 1.38
ABCA3Q99758 AC007064.4-201ENST00000637740 555 ntBASIC23.65■■□□□ 1.38
ABCA3Q99758 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ABCA3Q99758 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
ABCA3Q99758 AC092474.2-201ENST00000424288 719 ntBASIC23.64■■□□□ 1.38
ABCA3Q99758 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC23.64■■□□□ 1.38
ABCA3Q99758 AC074386.1-202ENST00000463561 864 ntBASIC23.64■■□□□ 1.38
ABCA3Q99758 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC23.64■■□□□ 1.38
ABCA3Q99758 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
ABCA3Q99758 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
ABCA3Q99758 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC23.64■■□□□ 1.38
ABCA3Q99758 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
ABCA3Q99758 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
ABCA3Q99758 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
ABCA3Q99758 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
ABCA3Q99758 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
ABCA3Q99758 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ABCA3Q99758 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
ABCA3Q99758 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
ABCA3Q99758 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC23.64■■□□□ 1.37
ABCA3Q99758 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ABCA3Q99758 KRT18P32-201ENST00000424695 1287 ntBASIC23.64■■□□□ 1.37
ABCA3Q99758 ACTG1P4-201ENST00000425123 1122 ntBASIC23.64■■□□□ 1.37
ABCA3Q99758 SIGLEC30P-201ENST00000455569 941 ntBASIC23.64■■□□□ 1.37
ABCA3Q99758 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC23.64■■□□□ 1.37
ABCA3Q99758 AC051619.7-201ENST00000568314 623 ntBASIC23.64■■□□□ 1.37
ABCA3Q99758 NAA60-208ENST00000570819 833 ntTSL 2 BASIC23.64■■□□□ 1.37
ABCA3Q99758 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC23.64■■□□□ 1.37
ABCA3Q99758 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.37
ABCA3Q99758 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC23.64■■□□□ 1.37
ABCA3Q99758 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
ABCA3Q99758 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ABCA3Q99758 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ABCA3Q99758 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
ABCA3Q99758 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms